Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00058 and RBAM_000350

See DNA alignment / Visit BSNT_00058 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence pep-align/BSNT_00058___yaaN.1.9828.seq
#    -bsequence pep-align/RBAM_000350___yaaN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00058___yaaN-RBAM_000350___yaaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00058___yaaN-RBAM_000350___yaaN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: RBAM_000350___yaaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity:     268/392 (68.4%)
# Similarity:   322/392 (82.1%)
# Gaps:          26/392 ( 6.6%)
# Score: 1337.0
# 
#
#=======================================

BSNT_00058___      1 MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQ--VRLVDVLPEENK     48
                     |.:|:||                    :::.|:.:|  ::|.|.|.||.:
RBAM_000350__      1 MAKDRSD--------------------DSMGAQNDQTPLKLADTLSEEKR     30

BSNT_00058___     49 EKAIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGE     98
                     |.|:|||.::|.:|||||||:|||||:.||.|||.||.|||:||.||:|:
RBAM_000350__     31 EAALQLAEKLDPENMQSIVLFGSQAQANLLEFSHTMIEHVQRKDAGEMGQ     80

BSNT_00058___     99 ILGELMKKLEQVNPDDLQSKKKGILARMFGRVSSSLQEVLSKYQKTSVQI    148
                     ||.:||.||:||||||||.|.||..||:|.|||.|:||||||||||||||
RBAM_000350__     81 ILADLMMKLDQVNPDDLQMKNKGFFARLFKRVSGSVQEVLSKYQKTSVQI    130

BSNT_00058___    149 DRISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELK    198
                     ||||.:||||||.|:||||||:|||.:||:||..|.:|||||||||:|||
RBAM_000350__    131 DRISRRLEHSKNVLLSDNKLLDQLYAQNKQYFTDLTMYIAAGELKLDELK    180

BSNT_00058___    199 TKTIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQVTIQ    248
                     ||.|||..::||..:|||||.||||||.||||||||||||||||||:|:|
RBAM_000350__    181 TKLIPEAARKAELQEHNQMAAQEVNDLRQFADRLDKRVHDLLLSRQITLQ    230

BSNT_00058___    249 SAPQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLLRQRNAVDAQ    298
                     ||||||||||||||||||||||||||||||||||||||||:|||:|.|.|
RBAM_000350__    231 SAPQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLMRQRSAADVQ    280

BSNT_00058___    299 QKVSDTTNELLLKNAELLKTNTIETARANERGLVDIDTLKKVQESLISTL    348
                     ||.:||||:|||||||||||:|:|||:|||||||:.:|||||||||:|||
RBAM_000350__    281 QKAADTTNQLLLKNAELLKTSTVETAKANERGLVEAETLKKVQESLVSTL    330

BSNT_00058___    349 EETLTIQEEGRIKRRQAEEELMMMEGDLKQKLLTIKER----    386
                     ||.::||||||:|||:|||||::||||||:|||.::..    
RBAM_000350__    331 EEIMSIQEEGRMKRRRAEEELVIMEGDLKKKLLDMRSGRDNG    372


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