Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00034 and RBAM_000210
See
DNA alignment /
Visit
BSNT_00034 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_00034___yaaH.1.9828.seq
# -bsequence pep-align/RBAM_000210___yaaH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00034___yaaH-RBAM_000210___yaaH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00034___yaaH-RBAM_000210___yaaH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00034___yaaH
# 2: RBAM_000210___yaaH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 330/428 (77.1%)
# Similarity: 378/428 (88.3%)
# Gaps: 3/428 ( 0.7%)
# Score: 1745.0
#
#
#=======================================
BSNT_00034___ 1 MVKQGDTLSAIASQYRTTANEIAETNEIPNPDSLVVGQTIVIPIAGQFYD 50
:|:||||||||::|||.||.|||.|::|||::||||||:||||.||:|:
RBAM_000210__ 1 -MKRGDTLSAIAARYRTAANVIAEANKLPNPNTLVVGQTLVIPIEGQYYE 49
BSNT_00034___ 51 VKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIP-PSPKRDI 99
||:||||.:||.:|:.:||||||||.||..|.|:.|.||||| .:.|.||
RBAM_000210__ 50 VKQGDTLAAIAGRFHISAAELARVNGIQPGTTLRAGTRLYIPQQANKPDI 99
BSNT_00034___ 100 ESNAYLEPRGNQVSENLQQAARESSPYLTYLGAFSFQAQRNGTLVAPPLT 149
|||||:||||..||.||||||||:|||||||||||||.||||||..||||
RBAM_000210__ 100 ESNAYIEPRGTSVSANLQQAAREASPYLTYLGAFSFQVQRNGTLKEPPLT 149
BSNT_00034___ 150 NLRSITESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVEN 199
||:||::..|||||||||||||.||||||||::|||.|||.:|..|||..
RBAM_000210__ 150 NLKSISDRHNTTLMMIITNLENDAFSDELGRLILNDNTVKTKLFQEIVST 199
BSNT_00034___ 200 ARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLEISTALAPKT 249
|::||||||||||||||||||||||:||||||.:|||||.:|||||||||
RBAM_000210__ 200 AKKYGFRDIHFDFEYLRPQDREAYNRFLREARTIFHREGWKISTALAPKT 249
BSNT_00034___ 250 SATQQGRWYEAHDYRAHGQIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDV 299
||||.|:|||||||||||:||||||:|||||||||||.||||||||||:|
RBAM_000210__ 250 SATQAGKWYEAHDYRAHGEIVDFVVIMTYEWGYSGGPAQAVSPIGPVRNV 299
BSNT_00034___ 300 IEYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQN 349
|||||||||::|||||||:||||||||:.. ||.|:||||||||.:|.::
RBAM_000210__ 300 IEYALTEMPSSKIVMGQNMYGYDWTLPFKQ-GTTAKAVSPQQAIALAARH 348
BSNT_00034___ 350 NASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGI 399
...||||:|||||||||||...|||||||||||||||||||||||:||||
RBAM_000210__ 349 KVDIQYDETAQAPFFRYTDENQRRHEVWFEDARSIQAKFNLIKELHLRGI 398
BSNT_00034___ 400 SYWKLGLSFPQNWLLLSDQFNVVKKTFR 427
||||||||||||||||.|||::||:|||
RBAM_000210__ 399 SYWKLGLSFPQNWLLLGDQFHIVKETFR 426
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.