Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00027 and RBAM_000160

See DNA alignment / Visit BSNT_00027 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence pep-align/BSNT_00027___serS.1.9828.seq
#    -bsequence pep-align/RBAM_000160___serS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00027___serS-RBAM_000160___serS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00027___serS-RBAM_000160___serS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00027___serS
# 2: RBAM_000160___serS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     396/444 (89.2%)
# Similarity:   417/444 (93.9%)
# Gaps:          19/444 ( 4.3%)
# Score: 2088.0
# 
#
#=======================================

BSNT_00027___      1 MGMRALFIFDKSIKKGVFRMLDTKMLRANFQEIKAKLVHKGEDLTDFDKF     50
                                        |:|||:|||||||:||||:.|||||:|||||
RBAM_000160__      1 -------------------MIDTKVLRANFQEVKAKLIPKGEDLSDFDKF     31

BSNT_00027___     51 EALDDRRRELIGKVEELKGKRNEVSQQVAVLKREKKEADHIIKEMREVGE    100
                     |.||::||||||||||||||||||||||||||||||:|||||||||||||
RBAM_000160__     32 EELDEKRRELIGKVEELKGKRNEVSQQVAVLKREKKDADHIIKEMREVGE     81

BSNT_00027___    101 EIKKLDEELRTVEAELDTILLSIPNIPHESVPVGETEDDNVEVRKWGEKP    150
                     |||||||||||||..|:|||||||||||:|||||||||||:|:|||||.|
RBAM_000160__     82 EIKKLDEELRTVETTLETILLSIPNIPHDSVPVGETEDDNIEIRKWGEAP    131

BSNT_00027___    151 SFAYEPKPHWDIADELGILDFERAAKVTGSRFVFYKGLGARLERALYNFM    200
                     :|:|||||||||||.|.|||||||:|||||||||||||||||||||||||
RBAM_000160__    132 AFSYEPKPHWDIADHLNILDFERASKVTGSRFVFYKGLGARLERALYNFM    181

BSNT_00027___    201 LDLHVDEYNYTEVIPPYMVNRASMTGTGQLPKFEEDAFKIREEDYFLIPT    250
                     ||||||||:||||||||||||.||||||||||||||||||||||||||||
RBAM_000160__    182 LDLHVDEYDYTEVIPPYMVNRTSMTGTGQLPKFEEDAFKIREEDYFLIPT    231

BSNT_00027___    251 AEVPITNMHRDEILSGDSLPINYAAFSACFRSEAGSAGRDTRGLIRQHQF    300
                     ||||||||||||||||::||||||||||||||||||||||||||||||||
RBAM_000160__    232 AEVPITNMHRDEILSGENLPINYAAFSACFRSEAGSAGRDTRGLIRQHQF    281

BSNT_00027___    301 NKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000160__    282 NKVELVKFVKPEDSYEELEKLTNQAERVLQLLELPYRVMSMCTGDLGFTA    331

BSNT_00027___    351 AKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000160__    332 AKKYDIEVWIPSQDTYREISSCSNFEAFQARRANIRFRREAKGKPEHVHT    381

BSNT_00027___    401 LNGSGLAVGRTVAAILENYQQEDGSVVIPKVLRPYMGNREVMKP    444
                     ||||||||||||||||||||||||||:|||||||||||:||:||
RBAM_000160__    382 LNGSGLAVGRTVAAILENYQQEDGSVIIPKVLRPYMGNKEVIKP    425


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