Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03836 and BSU40670

See DNA alignment / Visit BSNT_03836 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence pep-align/BSNT_03836.1.22522.seq
#    -bsequence pep-align/BSU40670___yybE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03836-BSU40670___yybE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03836-BSU40670___yybE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03836
# 2: BSU40670___yybE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     208/296 (70.3%)
# Similarity:   252/296 (85.1%)
# Gaps:           4/296 ( 1.4%)
# Score: 1132.0
# 
#
#=======================================

BSNT_03836         1 MEWEQLEYFQTLARIQHVTKAAETLSITQPALSRSIVRLENHLGVPLFDR     50
                     ||||||||||||||:|||||||::||||||||||||.|||||||||||||
BSU40670___yy      1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDR     50

BSNT_03836        51 QGRSIKLNKYGEIFLKRVDSMIREYTEGKEEIQSLLKPDQGEVSLGFLHT    100
                     |||||.||:||.|||:||.:|::||||||||||:|||||||.||||||||
BSU40670___yy     51 QGRSISLNQYGHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHT    100

BSNT_03836       101 LGTTIVPNLIGTFKDNYPKVQFQLNQSHSNLLLDKLKSGELDLCLLASFP    150
                     ||||:||:|||:|:..||.:.|||.|:||..||::||||:||||||||..
BSU40670___yy    101 LGTTLVPDLIGSFQQEYPNISFQLKQNHSYWLLERLKSGDLDLCLLASIK    150

BSNT_03836       151 VESNIMWKPLWKEELFLFLPKKHVLATREDITLNEIANEPFVLMKEGFAL    200
                     .|:.|.|..||.||||:|:|..|.||:||.|||||||.|.|:|:|:|:||
BSU40670___yy    151 PENPIQWIKLWSEELFVFVPNDHPLASRESITLNEIAGERFILLKKGYAL    200

BSNT_03836       201 RVTIDDIFEQVNITPNIVFEGEEATTIAGFVAAGLGVSILPDFKGLDQTN    250
                     |:|:|::||:.||.|||:||||||||.|||||||||:|||||.|||||:.
BSU40670___yy    201 RMTVDELFEKANIQPNIMFEGEEATTAAGFVAAGLGISILPDLKGLDQSK    250

BSNT_03836       251 IAKVRISWPRFERTVGLSWIKGKHLSPVTENFKQYIINQFPQIDSI    296
                     |.|:|:|||..:|.:|::||||:.||||.|.||||:|:.|.:    
BSU40670___yy    251 ITKIRVSWPECQRVIGIAWIKGRFLSPVAETFKQYVISHFSE----    292


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