Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06231 and BSU40540

See DNA alignment / Visit BSNT_06231 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_06231___yybR.1.22522.seq
#    -bsequence pep-align/BSU40540___yybR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06231___yybR-BSU40540___yybR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06231___yybR-BSU40540___yybR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06231___yybR
# 2: BSU40540___yybR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:     122/125 (97.6%)
# Similarity:   123/125 (98.4%)
# Gaps:           0/125 ( 0.0%)
# Score: 647.0
# 
#
#=======================================

BSNT_06231___      1 MSGKKNIYPNKEGCPVEFTLDVIGGKWKGILFYHMIDGKKRFNEFRRICP     50
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU40540___yy      1 MSEKKNIYPNKEGCPVEFTLDVIGGKWKGILFYHMIDGKKRFNEFRRICP     50

BSNT_06231___     51 SITQRMLTLQLRELEADGIVHREVYQQVPPKVEYSLTEFGRTLEPIVLQM    100
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40540___yy     51 SITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEPIVLQM    100

BSNT_06231___    101 KEWGESNRDVLESYRSNGLLKDQQK    125
                     |||||||||||||||||||:|||||
BSU40540___yy    101 KEWGESNRDVLESYRSNGLVKDQQK    125


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