Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06137 and BSU40021

See DNA alignment / Visit BSNT_06137 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_06137.1.22522.seq
#    -bsequence pep-align/BSU40021___yxzK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06137-BSU40021___yxzK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06137-BSU40021___yxzK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06137
# 2: BSU40021___yxzK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:     117/134 (87.3%)
# Similarity:   117/134 (87.3%)
# Gaps:          17/134 (12.7%)
# Score: 569.0
# 
#
#=======================================

BSNT_06137         1 -----------------MIGEAIQHLFHLPVSGSIVGLVLLLICLGLRIV     33
                                      |||||||||||||||||||||||||||||||||
BSU40021___yx      1 MKVIRIILQVLILYVFFMIGEAIQHLFHLPVSGSIVGLVLLLICLGLRIV     50

BSNT_06137        34 PVSIIEDGAGFLLSFLPLLFIPAMTGVINYPSLISFNGLMLLITVVLSTI     83
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40021___yx     51 PVSIIEDGAGFLLSFLPLLFIPAMTGVINYPSLISFNGLMLLITVVLSTI    100

BSNT_06137        84 VTIIAAGFASQLLEKKAKKREEKEKCSKHVSRSL    117
                     ||||||||||||||||||||||||||||||||||
BSU40021___yx    101 VTIIAAGFASQLLEKKAKKREEKEKCSKHVSRSL    134


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.