Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06131 and BSU39980

See DNA alignment / Visit BSNT_06131 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:42
# Commandline: needle
#    -asequence pep-align/BSNT_06131___yxaG.1.22522.seq
#    -bsequence pep-align/BSU39980___qodI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06131___yxaG-BSU39980___qodI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06131___yxaG-BSU39980___qodI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06131___yxaG
# 2: BSU39980___qodI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity:     329/344 (95.6%)
# Similarity:   331/344 (96.2%)
# Gaps:           7/344 ( 2.0%)
# Score: 1745.0
# 
#
#=======================================

BSNT_06131___      1 MKTLCTHSLPKEKMPYLLRSGEGERYLFGRQVATVMANGRSTGDLFEIVL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39980___qo      1 MKTLCTHSLPKEKMPYLLRSGEGERYLFGRQVATVMANGRSTGDLFEIVL     50

BSNT_06131___     51 LSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39980___qo     51 LSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAG    100

BSNT_06131___    101 TPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39980___qo    101 TPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNE    150

BSNT_06131___    151 RFAEAAAVADIVFLDEGKPACSAKLAELTELPDGAVPYVLESGEGDRLLT    200
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU39980___qo    151 RFAEAAAVADIVFLDEAKPACSAKLAELTELPDGAVPYVLESGEGDRLLT    200

BSNT_06131___    201 GDQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEHHTETFYCLEGQM    250
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
BSU39980___qo    201 GDQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQM    250

BSNT_06131___    251 TMWADGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGLFEPFFR    300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU39980___qo    251 TMWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGLFEPFFR    300

BSNT_06131___    301 TLGDPYEGHIFPCEPQALHFDRVLQNIEALDLKVDYRADIVSAR    344
                     ||||||||||||||||||.|||:|||||||||||...       
BSU39980___qo    301 TLGDPYEGHIFPCEPQALRFDRILQNIEALDLKVMKP-------    337


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.