Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06029 and BSU39300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence pep-align/BSNT_06029___yxiD.1.22522.seq
# -bsequence pep-align/BSU39300___yxiD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06029___yxiD-BSU39300___yxiD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06029___yxiD-BSU39300___yxiD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06029___yxiD
# 2: BSU39300___yxiD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 615
# Identity: 356/615 (57.9%)
# Similarity: 379/615 (61.6%)
# Gaps: 192/615 (31.2%)
# Score: 1657.0
#
#
#=======================================
BSNT_06029___ 0 -------------------------------------------------- 0
BSU39300___yx 1 MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGD 50
BSNT_06029___ 1 ------------------MFIDEYKKVLKQTQHAISSVESDSHGMIAEAF 32
:|||||||||||||||||||||:|||||||||
BSU39300___yx 51 AIRTFYEECHKPFLLFFGIFIDEYKKVLKQTQHAISSVESNSHGMIAEAF 100
BSNT_06029___ 33 LSHDARHGVKHAREVTEQLTDAVNRQTSAIGHIVSLPAVNDTFFRMETEQ 82
||||||||||||||||||||||||||||||.||||||.|||:||||||||
BSU39300___yx 101 LSHDARHGVKHAREVTEQLTDAVNRQTSAIDHIVSLPTVNDSFFRMETEQ 150
BSNT_06029___ 83 AERLITDTLHKLFQFDGQQTQALE-AKSDFQTMKKYIDQLETMYTGPKIE 131
|||||:|||:|||||||||||||| |||||||||||||||||||||||||
BSU39300___yx 151 AERLISDTLNKLFQFDGQQTQALEAAKSDFQTMKKYIDQLETMYTGPKIE 200
BSNT_06029___ 132 ITGYKSGSILKSQEQENINQTFGAINPQMKQPDDSPMEMMLKKLAENEKS 181
||||||||||||||:|||||.||||||||||.||||||||||||||||||
BSU39300___yx 201 ITGYKSGSILKSQEEENINQIFGAINPQMKQADDSPMEMMLKKLAENEKS 250
BSNT_06029___ 182 KVDSVVKTGHSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYN 231
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39300___yx 251 KVDSVVKTGDSKKVSKNIIVINGKVYNTSEHREHIKTDFSNAEVKQVVYN 300
BSNT_06029___ 232 DTLYNVYISGNDMKLEPVVSLSDIKVDENGYVKILEAAVELTGVYDLFKA 281
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU39300___yx 301 DTLYNVYISGNDMKLEPVVSLSDIKVDENGYVKILETAVELTGVYDLFKA 350
BSNT_06029___ 282 ATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINDGKKAK 331
||||||||||||||||||||||||||||||||||||||||||||:|||||
BSU39300___yx 351 ATGRDPVSGEKVTGKDRVVASINSVPFAKIAKLEKLIDINKLINNGKKAK 400
BSNT_06029___ 332 KASEVKNVAKDTG---NGVPSYGKK-------------------SVPKG- 358
|||||||||||.| |.|.....| .:||.
BSU39300___yx 401 KASEVKNVAKDKGKIANDVSGSANKINSDLIKKYARDIEQRTGRELPKNQ 450
BSNT_06029___ 359 -----------PYREVHGFPV----------KVKPGAQEKHIPNT----P 383
.|:::. |: |||....::...|| |
BSU39300___yx 451 IDKLKEALRNKEYKKMS--PIETAKHRTKFDKVKNKVIKEWEENTGQKWP 498
BSNT_06029___ 384 NYKQEIANGKNKSIF--YGDNKTAQELLDK-FAGK--------------- 415
.||:.:.:.|...|. .||...|..:::. |.|:
BSU39300___yx 499 VYKENVVSEKTGKIIRKKGDKYDAHHIIENTFGGEHEWWNMHPAKFPNEH 548
BSNT_06029___ 416 -----------GQLLPNGKKERVDFGKPIGKYYDRDTGEYIETTRGMIHY 454
.:|...|||:
BSU39300___yx 549 QAGIHGTGSPANELFKGGKKK----------------------------- 569
BSNT_06029___ 455 GKDGAHIVPSEPLKK 469
BSU39300___yx 569 --------------- 569
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