Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05966 and BSU38990

See DNA alignment / Visit BSNT_05966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence pep-align/BSNT_05966___scoA.1.22522.seq
#    -bsequence pep-align/BSU38990___scoA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05966___scoA-BSU38990___scoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05966___scoA-BSU38990___scoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05966___scoA
# 2: BSU38990___scoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     237/238 (99.6%)
# Similarity:   238/238 (100.0%)
# Gaps:           0/238 ( 0.0%)
# Score: 1209.0
# 
#
#=======================================

BSNT_05966___      1 MGKVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38990___sc      1 MGKVLSSSKEAAKLIHDGDTLIAGGFGLCGIPEQLILSIRDQGVKDLTVV     50

BSNT_05966___     51 SNNCGVDDWGLGLLLANKQIKKMIASYVGENKIFERQFLSGELEVELVPQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38990___sc     51 SNNCGVDDWGLGLLLANKQIKKMIASYVGENKIFERQFLSGELEVELVPQ    100

BSNT_05966___    101 GTLAERIRAGGAGIPGFYTATGVGTSIAEGKEHKTFGGRTYVLERGITGD    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38990___sc    101 GTLAERIRAGGAGIPGFYTATGVGTSIAEGKEHKTFGGRTYVLERGITGD    150

BSNT_05966___    151 VAIVKAWKADTMGNLVFRKTARNFNPIAAMAGKITIAEAEEIVEAGELDP    200
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
BSU38990___sc    151 VAIVKAWKADTMGNLIFRKTARNFNPIAAMAGKITIAEAEEIVEAGELDP    200

BSNT_05966___    201 DHIHTPGIYVQHVVLGASQEKRIEKRTVQQASGKGEAK    238
                     ||||||||||||||||||||||||||||||||||||||
BSU38990___sc    201 DHIHTPGIYVQHVVLGASQEKRIEKRTVQQASGKGEAK    238


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