Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05935 and BSU38770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence pep-align/BSNT_05935.1.22522.seq
# -bsequence pep-align/BSU38770___cimH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05935-BSU38770___cimH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05935-BSU38770___cimH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05935
# 2: BSU38770___cimH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 224/450 (49.8%)
# Similarity: 225/450 (50.0%)
# Gaps: 225/450 (50.0%)
# Score: 1125.0
#
#
#=======================================
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 1 MGELQTHMQLQTDTIHEGVRKENWFAKAMNIKVGIIPLPVYALLFILITV 50
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 51 FVMHHDVKSDILTSIAVMAFFGFTFAQIGKSIPIVRSIGGPAILATFIPS 100
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 101 AVVYYHLLPNDIVKSTTEFTENSNFLYLFIAGIVVGSILGMKRETLVKAF 150
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 151 MKIFIPLIVGSVTAAIVGLAVGTLLGLGFQHTLLYIVIPIMAGGVGEGAI 200
BSNT_05935 1 -------------------------MLGSLCAIILAGLLNRIGKKKPEWT 25
|||||||||||||||||||||||||
BSU38770___ci 201 PLSIGYSDIMPISQGEAFALVLPSIMLGSLCAIILAGLLNRIGKKKPEWT 250
BSNT_05935 26 GNGKVDRSEEESPALEESQSGQQMFNLSLFAAGGILAVSLYLVGMLAHDF 75
|||||||||||||||||||||||||||||||:||||||||||||||||||
BSU38770___ci 251 GNGKVDRSEEESPALEESQSGQQMFNLSLFASGGILAVSLYLVGMLAHDF 300
BSNT_05935 76 FGFPAPVAMLLLAVLIKLFRLVPASIENGAFGVSRFFSTAVTYPLLFAIG 125
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 301 FGFPAPVAMLLLAVLIKLFRLVPASIENGAFGVSRFFSTAVTYPLLFAIG 350
BSNT_05935 126 VSMTPWDKLVAAFNLSNIITILSVVVTMMAVGFFTGKWLNMYPIETAIIN 175
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 351 VSMTPWDKLVAAFNLSNIITILSVVVTMMAVGFFTGKWLNMYPIETAIIN 400
BSNT_05935 176 ACHSGQGGTGDVAILSAAERLELMPFAQVSTRIGGAITVSLTLLLLHQFY 225
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 401 ACHSGQGGTGDVAILSAAERLELMPFAQVSTRIGGAITVSLTLLLLHQFY 450
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