Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05907 and BSU38610

See DNA alignment / Visit BSNT_05907 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence pep-align/BSNT_05907.1.22522.seq
#    -bsequence pep-align/BSU38610___yxzF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05907-BSU38610___yxzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05907-BSU38610___yxzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05907
# 2: BSU38610___yxzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      50/61 (82.0%)
# Similarity:    50/61 (82.0%)
# Gaps:           9/61 (14.8%)
# Score: 249.0
# 
#
#=======================================

BSNT_05907         1 MFKEEAIRGMVEKKEGRIGALKKMIKTVIKWAPVIYPIVRKIMKDRKVCK     50
                              ||||||||||||||||||||||||||||||||||||||..|
BSU38610___yx      1 ---------MVEKKEGRIGALKKMIKTVIKWAPVIYPIVRKIMKDRKASK     41

BSNT_05907        51 QKNMSASRTAG     61
                     |||||||||||
BSU38610___yx     42 QKNMSASRTAG     52


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.