Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05826 and BSU38100

See DNA alignment / Visit BSNT_05826 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_05826___ywcH.1.22522.seq
#    -bsequence pep-align/BSU38100___ywcH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05826___ywcH-BSU38100___ywcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05826___ywcH-BSU38100___ywcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05826___ywcH
# 2: BSU38100___ywcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     331/333 (99.4%)
# Similarity:   332/333 (99.7%)
# Gaps:           0/333 ( 0.0%)
# Score: 1695.0
# 
#
#=======================================

BSNT_05826___      1 MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw      1 MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKR     50

BSNT_05826___     51 LAGSSPEVLISHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw     51 LAGSSPEVLISHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPG    100

BSNT_05826___    101 RIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKH    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    101 RIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKH    150

BSNT_05826___    151 RFPNLTAAPHISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    151 RFPNLTAAPHISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEG    200

BSNT_05826___    201 TVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGAVLDFTLLAGE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    201 TVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGAVLDFTLLAGE    250

BSNT_05826___    251 QGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKKRLLALS    300
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BSU38100___yw    251 QGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKERLLALS    300

BSNT_05826___    301 KAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD    333
                     .||||||||||||||||||||||||||||||||
BSU38100___yw    301 NAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD    333


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.