Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05617 and BSU36770

See DNA alignment / Visit BSNT_05617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_05617___ywmB.1.22522.seq
#    -bsequence pep-align/BSU36770___ywmB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05617___ywmB-BSU36770___ywmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05617___ywmB-BSU36770___ywmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05617___ywmB
# 2: BSU36770___ywmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     243/248 (98.0%)
# Similarity:   244/248 (98.4%)
# Gaps:           2/248 ( 0.8%)
# Score: 1254.0
# 
#
#=======================================

BSNT_05617___      1 MNMKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSI     50
                       ||||||||||||||||||||||||||||||||||||||||||||||||
BSU36770___yw      1 --MKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSI     48

BSNT_05617___     51 DKWTLHAKQNMSLTEKEFYQKVQRLKSEYRQYDWVIAREDKMIKAIGTYT    100
                     ||||||||||:|||||||||||||||.|||||||||||||||||||||||
BSU36770___yw     49 DKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYT     98

BSNT_05617___    101 DKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36770___yw     99 DKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETL    148

BSNT_05617___    151 GIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36770___yw    149 GIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFV    198

BSNT_05617___    201 SISAFTDEWEEYIMTSKHKMNLQIALRSAEMGGKHTVTVGTPIVTTEY    248
                     |||||||||||||||||||||||||||||.||||||||||||||||||
BSU36770___yw    199 SISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTPIVTTEY    246


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