Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05581 and BSU36560

See DNA alignment / Visit BSNT_05581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_05581___ywnH.1.22522.seq
#    -bsequence pep-align/BSU36560___ywnH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05581___ywnH-BSU36560___ywnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05581___ywnH-BSU36560___ywnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05581___ywnH
# 2: BSU36560___ywnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     160/165 (97.0%)
# Similarity:   162/165 (98.2%)
# Gaps:           2/165 ( 1.2%)
# Score: 838.0
# 
#
#=======================================

BSNT_05581___      1 MNMTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFLGHTE     50
                       |||||||||||||||||||||||||||||||||||||||||||.||||
BSU36560___yw      1 --MTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTE     48

BSNT_05581___     51 ARPLYVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACRGKGVGS    100
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36560___yw     49 SRPLYVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACRGKGVGS     98

BSNT_05581___    101 YLLQEALRIAPDLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEM    150
                     |||||||||||:||||||||||||||||||||||||||||||||||||||
BSU36560___yw     99 YLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEM    148

BSNT_05581___    151 DGKRYDLKILGRELS    165
                     |||||||||||||||
BSU36560___yw    149 DGKRYDLKILGRELS    163


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.