Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05489 and BSU36020

See DNA alignment / Visit BSNT_05489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_05489___alsR.1.22522.seq
#    -bsequence pep-align/BSU36020___alsR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05489___alsR-BSU36020___alsR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05489___alsR-BSU36020___alsR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05489___alsR
# 2: BSU36020___alsR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     301/302 (99.7%)
# Similarity:   301/302 (99.7%)
# Gaps:           0/302 ( 0.0%)
# Score: 1543.0
# 
#
#=======================================

BSNT_05489___      1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al      1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKR     50

BSNT_05489___     51 TKRFVELTAAGEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al     51 TKRFVELTAAGEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGS    100

BSNT_05489___    101 ATYEFLPPIVREYRKKFPCVKIELREISSSRQQEELLKGNIDIGILHPPL    150
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU36020___al    101 ATYEFLPPIVREYRKKFPSVKIELREISSSRQQEELLKGNIDIGILHPPL    150

BSNT_05489___    151 QHTALHIETAQSSPCVLALPKQHPLTSKESITIEDLRDEPIITVAKEAWP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    151 QHTALHIETAQSSPCVLALPKQHPLTSKESITIEDLRDEPIITVAKEAWP    200

BSNT_05489___    201 TLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMTFVPSSAKKLF    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    201 TLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMTFVPSSAKKLF    250

BSNT_05489___    251 NLDVTYRKMDQIQLNAEWVIAYRKDNHNPLIKHFIHISNCQQTRTKESDA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36020___al    251 NLDVTYRKMDQIQLNAEWVIAYRKDNHNPLIKHFIHISNCQQTRTKESDA    300

BSNT_05489___    301 GT    302
                     ||
BSU36020___al    301 GT    302


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