Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05461 and BSU35820
See
DNA alignment /
Visit
BSNT_05461 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05461___gerBC.1.22522.seq
# -bsequence pep-align/BSU35820___gerBC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05461___gerBC-BSU35820___gerBC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05461___gerBC-BSU35820___gerBC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05461___gerBC
# 2: BSU35820___gerBC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 341/374 (91.2%)
# Similarity: 356/374 (95.2%)
# Gaps: 0/374 ( 0.0%)
# Score: 1808.0
#
#
#=======================================
BSNT_05461___ 1 MKTMLKLFVMVLMLQMLCGCWDVKNIEKLSFARGLALDETDDHQYKLTYQ 50
|||..|..||..||..||||||||:||:||||||||:|||:|||||||||
BSU35820___ge 1 MKTASKFSVMFFMLLALCGCWDVKDIEQLSFARGLAIDETNDHQYKLTYQ 50
BSNT_05461___ 51 NLLPQSEDSQASGKPEFVNVTSHGKTILEAVSDVSIKDPPIYSDHLKVIL 100
||||||||||||||||||||||||||||||||||||||||:|||||||||
BSU35820___ge 51 NLLPQSEDSQASGKPEFVNVTSHGKTILEAVSDVSIKDPPVYSDHLKVIL 100
BSNT_05461___ 101 LGEKLMRNQNIDQVFNHFIRDDELRRSSYLMAARGKAGDIFTKGSPKQQL 150
||||||||||:|||.||||||||||||||||||||.|.|:||||:|.||.
BSU35820___ge 101 LGEKLMRNQNVDQVLNHFIRDDELRRSSYLMAARGNAADVFTKGNPNQQQ 150
BSNT_05461___ 151 PMPSEKLIDLTNNSGYNGKIMMPLRIGRASIYCQNGYSFLIQAVKNQKGK 200
|||||||||||.:||||||||:||||||||:|.|||||:|||||||:|||
BSU35820___ge 151 PMPSEKLIDLTTHSGYNGKIMIPLRIGRASVYSQNGYSYLIQAVKNEKGK 200
BSNT_05461___ 201 AKYDGAGIIKRGSNKLVGFLSADETQTLTWVMGTIQGGVMPTTDKGHPIT 250
||||||||||||||||||||||||||||:|||||||||||||||||||||
BSU35820___ge 201 AKYDGAGIIKRGSNKLVGFLSADETQTLSWVMGTIQGGVMPTTDKGHPIT 250
BSNT_05461___ 251 FEIKKSKTKIKPVIDNGKPVFQISVKTKGILTEDQNPNENSFSKRYLHRL 300
||||||||||||||:||||||.||||||||||||||||||||||.|||||
BSU35820___ge 251 FEIKKSKTKIKPVIENGKPVFHISVKTKGILTEDQNPNENSFSKSYLHRL 300
BSNT_05461___ 301 ENIFEKKLERDVKQVMDKLQHEYKTDPVFLSDHIRIQHPDYWNKVKGHWD 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35820___ge 301 ENIFEKKLERDVKQVMDKLQHEYKTDPVFLSDHIRIQHPDYWNKVKGHWD 350
BSNT_05461___ 351 EIFSEADFKYDISFKIINFGTVGK 374
|||||.||||||||||||||||||
BSU35820___ge 351 EIFSETDFKYDISFKIINFGTVGK 374
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.