Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05437 and BSU35660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence pep-align/BSNT_05437.1.22522.seq
# -bsequence pep-align/BSU35660___mnaA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05437-BSU35660___mnaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05437-BSU35660___mnaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: BSU35660___mnaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 243/388 (62.6%)
# Similarity: 274/388 (70.6%)
# Gaps: 68/388 (17.5%)
# Score: 1200.0
#
#
#=======================================
BSNT_05437 1 MKKLKVMTVFGTRPEAIKMAPLVLELRKYPQIESYVTVTAQHRQMLDQVL 50
||||||||||||||||||||||||||:|||:|:|||||||||||||||||
BSU35660___mn 1 MKKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVL 50
BSNT_05437 51 EAFDLKPDFDLNIMKERQTLAEITSNALMKLDELFQSIKPDIVLVHGDTT 100
:||.:|||||||||||||||||||||||::|||||:.|||||||||||||
BSU35660___mn 51 DAFHIKPDFDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTT 100
BSNT_05437 101 TTFAGSLAAYYHQISVGHVEAGLRTGNKYSPFPEELNRLLTGSIADFHFA 150
|||||||||:||||:|||||||||||||||||||||||.:||:|||.|||
BSU35660___mn 101 TTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFA 150
BSNT_05437 151 PTEQAEKNLLHENKDPETIFVTGNTAIDALRTTVRDGYAHPVLEKIGSDK 200
||.||:.|||.|||..::||||||||||||.|||||||:||||:::|.||
BSU35660___mn 151 PTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDK 200
BSNT_05437 201 MILLTAHRRENLGKPMENMFKAIRRIVEEFDGVQVVYPVHLNPAVREAAA 250
|||||||||||||:|||||||||||||.||:.|||||||||||.|||||.
BSU35660___mn 201 MILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAH 250
BSNT_05437 251 KHFGDLDKVHLLEPLEVIDFTTSLLK----LTSSSPTRVGCRKKRRRLES 296
|||||.|:|||:||||||||.....| ||.|... :....|
BSU35660___mn 251 KHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-------QEEAPS 293
BSNT_05437 297 RSSCFAILRN------GQKAFGPVRLNWQERMKIRSIN------------ 328
......:||: |.:| |.::|...:...|..:.
BSU35660___mn 294 LGKPVLVLRDTTERPEGVEA-GTLKLAGTDEENIYQLAKQLLTDPDEYKK 342
BSNT_05437 328 -------------------------------------- 328
BSU35660___mn 343 MSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFTGK 380
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