Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05378 and BSU35350

See DNA alignment / Visit BSNT_05378 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05378.1.22522.seq
#    -bsequence pep-align/BSU35350___yvyC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05378-BSU35350___yvyC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05378-BSU35350___yvyC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05378
# 2: BSU35350___yvyC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      63/109 (57.8%)
# Similarity:    63/109 (57.8%)
# Gaps:          46/109 (42.2%)
# Score: 331.0
# 
#
#=======================================

BSNT_05378         1 ----------------------------------------------MNKL      4
                                                                   ||||
BSU35350___yv      1 MNIERLTTLQPVWDRYDTQIHNQKDNDNEVPVHQVSYTNLAEMVGEMNKL     50

BSNT_05378         5 LEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAMTEF     54
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35350___yv     51 LEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAMTEF    100

BSNT_05378        55 LGLFVDEKK     63
                     |||||||||
BSU35350___yv    101 LGLFVDEKK    109


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.