Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05332 and BSU35030

See DNA alignment / Visit BSNT_05332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence pep-align/BSNT_05332___yvoA.1.22522.seq
#    -bsequence pep-align/BSU35030___yvoA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05332___yvoA-BSU35030___yvoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05332___yvoA-BSU35030___yvoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05332___yvoA
# 2: BSU35030___yvoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     243/243 (100.0%)
# Similarity:   243/243 (100.0%)
# Gaps:           0/243 ( 0.0%)
# Score: 1241.0
# 
#
#=======================================

BSNT_05332___      1 MNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35030___yv      1 MNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMT     50

BSNT_05332___     51 VRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTEDMKSRGMTP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35030___yv     51 VRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTEDMKSRGMTP    100

BSNT_05332___    101 GSRLIDYQLIDSTEELAAILGCGHPSSIHKITRVRLANDIPMAIESSHIP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35030___yv    101 GSRLIDYQLIDSTEELAAILGCGHPSSIHKITRVRLANDIPMAIESSHIP    150

BSNT_05332___    151 FELAGELNESHFQSSIYDHIERYNSIPISRAKQELEPSAATTEEANILGI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35030___yv    151 FELAGELNESHFQSSIYDHIERYNSIPISRAKQELEPSAATTEEANILGI    200

BSNT_05332___    201 QKGAPVLLIKRTTYLQNGTAFEHAKSVYRGDRYTFVHYMDRLS    243
                     |||||||||||||||||||||||||||||||||||||||||||
BSU35030___yv    201 QKGAPVLLIKRTTYLQNGTAFEHAKSVYRGDRYTFVHYMDRLS    243


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