Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05303 and BSU34850

See DNA alignment / Visit BSNT_05303 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05303___yvcA.1.22522.seq
#    -bsequence pep-align/BSU34850___yvcA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05303___yvcA-BSU34850___yvcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05303___yvcA-BSU34850___yvcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05303___yvcA
# 2: BSU34850___yvcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     165/241 (68.5%)
# Similarity:   200/241 (83.0%)
# Gaps:           1/241 ( 0.4%)
# Score: 877.0
# 
#
#=======================================

BSNT_05303___      1 MKKIIFICFSLLLALTGGCSMKDNDKNSTNDNKTEAVKPKDMDPKDLPQV     50
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU34850___yv      1 MKKIIFICFSLLLALTGGCSMNDNDKNSTNDNKTEAVKPKDMDPKDLPQV     50

BSNT_05303___     51 PAFQDEKTREYMVSTKEEEPGYYLLESKLKGFRMLFPEDGEYVPDLSS-K     99
                     ||||||||||||||||||||||||||||||||||||||||:|:...|| .
BSU34850___yv     51 PAFQDEKTREYMVSTKEEEPGYYLLESKLKGFRMLFPEDGKYLSRRSSLT    100

BSNT_05303___    100 GENEETIVFDSFNKKTNIQYDGQLDYHQEKSFANDKDTMLDIVSGRNSYK    149
                     |:|:|:|.|:|::|.||:.:||.:.|::|:||||:..||||||||:|.||
BSU34850___yv    101 GKNKESIGFNSYDKDTNVMFDGHVTYYKEESFANEPKTMLDIVSGKNDYK    150

BSNT_05303___    150 GKYEERELSDKIVYSAQKKSSFDDVDEKNNFSYRFFGYVKSKKEEYLGIE    199
                     |:|::.......:|:|:||..|||:|.|.|:||.:||||||.:|:.||:|
BSU34850___yv    151 GEYKKSSKKKTDIYTAKKKDIFDDIDRKYNYSYSYFGYVKSTEEDNLGVE    200

BSNT_05303___    200 YSFRFSCYKGKEVCSLKKEEAEKKVRKIIDSITFLKVKKEK    240
                     |:|...|....:.|||.:|:|:.||.|:|:|||||..||||
BSU34850___yv    201 YAFTLGCKNENQPCSLDEEKAKNKVEKLINSITFLIDKKEK    241


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