Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05299 and BSU34810

See DNA alignment / Visit BSNT_05299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_05299___yvcD.1.22522.seq
#    -bsequence pep-align/BSU34810___yvcD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05299___yvcD-BSU34810___yvcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05299___yvcD-BSU34810___yvcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05299___yvcD
# 2: BSU34810___yvcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity:     479/484 (99.0%)
# Similarity:   479/484 (99.0%)
# Gaps:           0/484 ( 0.0%)
# Score: 2501.0
# 
#
#=======================================

BSNT_05299___      1 MGKHTSEHKNHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34810___yv      1 MGKHTSEHKNHAQIVQLLQDGQYFFHKGLKAYKERNLKRASKLIQRAVHL     50

BSNT_05299___     51 EPEDSEMLSQLAVIYSEMGQYQESNDLLDYIMANLEAEMPECHYFKANNF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34810___yv     51 EPEDSEMLSQLAVIYSEMGQYQESNDLLDYIMANLEAEMPECHYFKANNF    100

BSNT_05299___    101 AHLGLFQEAYKEAAAYSDADPDGEFAEENDSLLDLLDLGDDGIEDSLYDQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34810___yv    101 AHLGLFQEAYKEAAAYSDADPDGEFAEENDSLLDLLDLGDDGIEDSLYDQ    150

BSNT_05299___    151 DELLVKQDRAKSLLESGQLAEAVAALEEITAEYPELWSAYNNLALAYFYS    200
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU34810___yv    151 DELLVKQDRAKSLLESGQLAEAVAALEEITTEYPELWSAYNNLALAYFYS    200

BSNT_05299___    201 GNVVKAKQTAYEVLSHNEGNLHALCNLLVFYYYEREDEKVAELSDQLSNV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34810___yv    201 GNVVKAKQTAYEVLSHNEGNLHALCNLLVFYYYEREDEKVAELSDQLSNV    250

BSNT_05299___    251 YPMLLEQRYKLGATLALVGRYEIGYKWLKSLYKIGFEGDDTFFYWLSCSA    300
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU34810___yv    251 YPMLLEQRYKLGATLALVGRYEIGYKWLKSLYKTGFEGDDTFFYWLSCSA    300

BSNT_05299___    301 YFTGHTDFAETIWRKVESQYPGEDRPAPWIERREALPSSVEQRLAAYYIS    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34810___yv    301 YFTGHTDFAETIWRKVESQYPGEDRPAPWIERREALPSSVEQRLAAYYIS    350

BSNT_05299___    351 STKGETEHLEAVIRSKRITAPFENHFVKLLLNGDSGAADVSEDALFAYQT    400
                     |||||||||||||||||||||||.|||||||||||.||||||||||||||
BSU34810___yv    351 STKGETEHLEAVIRSKRITAPFETHFVKLLLNGDSAAADVSEDALFAYQT    400

BSNT_05299___    401 VKLLEQAEKEEMKTEVMSCWVFHVIQQIRAVAPLKNEKGWAAAICYIWKE    450
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU34810___yv    401 VKLLEQAEKEEMKTEVMSCWVFHVIQQIRAAAPLKNEKGWAAAICYIWKE    450

BSNT_05299___    451 AHGKQDTKKDTAARFGISPATLTKYMKYIDDILE    484
                     ||||||||||||||||||||||||||||||||||
BSU34810___yv    451 AHGKQDTKKDTAARFGISPATLTKYMKYIDDILE    484


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.