Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05289 and BSU34730

See DNA alignment / Visit BSNT_05289 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_05289___yvcN.1.22522.seq
#    -bsequence pep-align/BSU34730___yvcN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05289___yvcN-BSU34730___yvcN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05289___yvcN-BSU34730___yvcN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05289___yvcN
# 2: BSU34730___yvcN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     244/254 (96.1%)
# Similarity:   248/254 (97.6%)
# Gaps:           3/254 ( 1.2%)
# Score: 1296.0
# 
#
#=======================================

BSNT_05289___      1 ---MSDFLKDCFQKIGWEKDHVSFGDLPLFLKAMAYRFPFENRAVLAKEN     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv      1 MIKMSDFLKDCFQKIGWEKDHVSFGDLPLFLKAMAYRFPFENRAVLAKEN     50

BSNT_05289___     48 YKITKEELWRRLLKDQHGGLCYDLNGFLYFVLREAGFHVKLIRGTVYAGD     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv     51 YKITKEELWRRLLKDQHGGLCYDLNGFLYFVLREAGFHVKLIRGTVYAGD    100

BSNT_05289___     98 QEGWALEGTHAAVWLSAENGDYLVDIGFGINLALQPIPLSGETVQSPVGS    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34730___yv    101 QEGWALEGTHAAVWLSAENGDYLVDIGFGINLALQPIPLSGETVQSPVGS    150

BSNT_05289___    148 FRIKREETEKGSHVLLMDKGEGWQIGYAFTLEESDLGDLDNMKDIIHSHE    197
                     ||||:|||||||:|||||||||||||||||||||||||||||||||||||
BSU34730___yv    151 FRIKKEETEKGSYVLLMDKGEGWQIGYAFTLEESDLGDLDNMKDIIHSHE    200

BSNT_05289___    198 KSPFNKSPLASKLTPSGRMVMSERHFTIHENGSDIQKSDIGPSEFEEKLN    247
                     |||||||.||||||||||||||||||||:|||.:|||||||||.||||||
BSU34730___yv    201 KSPFNKSLLASKLTPSGRMVMSERHFTIYENGGNIQKSDIGPSGFEEKLN    250

BSNT_05289___    248 THFL    251
                     ||||
BSU34730___yv    251 THFL    254


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.