Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05167 and BSU34170
See
DNA alignment /
Visit
BSNT_05167 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence pep-align/BSNT_05167___lacR.1.22522.seq
# -bsequence pep-align/BSU34170___ganR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05167___lacR-BSU34170___ganR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05167___lacR-BSU34170___ganR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05167___lacR
# 2: BSU34170___ganR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity: 330/332 (99.4%)
# Similarity: 330/332 (99.4%)
# Gaps: 2/332 ( 0.6%)
# Score: 1687.0
#
#
#=======================================
BSNT_05167___ 1 MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKK 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 1 MATIKDIAQEAGFSISTVSRVLNNDESLSVPDETREKIYEAAEKLNYRKK 50
BSNT_05167___ 51 TVRPLVKHIAFLYWLTDKEELEDVYFKTMRLEVEKLAKAFNVDMTTYKIA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 51 TVRPLVKHIAFLYWLTDKEELEDVYFKTMRLEVEKLAKAFNVDMTTYKIA 100
BSNT_05167___ 101 DGIESIPEHTEGFIAVGTFSDEELAFLRNLTENGVFIDSTPDPDHFDSVR 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 101 DGIESIPEHTEGFIAVGTFSDEELAFLRNLTENGVFIDSTPDPDHFDSVR 150
BSNT_05167___ 151 PDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYM 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 151 PDLAQMTRKTVNILTEKGHKSIGFIGGTYKNPNTNQDEMDIREQTFRSYM 200
BSNT_05167___ 201 REKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAV 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 201 REKAMLDERYIFCHRGFSVENGYRLMSAAIDTLGDQLPTAFMIAADPIAV 250
BSNT_05167___ 251 GCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAV 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU34170___ga 251 GCLQALNEKGIAIPNRVSIVSINNISFAKYVSPPLTTFHIDIHELCKNAV 300
BSNT_05167___ 301 QLLLEQVQDKRRTVKTLYVGAELIVRKSMNEG 332
||||||||||||||||||||||||||||||
BSU34170___ga 301 QLLLEQVQDKRRTVKTLYVGAELIVRKSMN-- 330
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.