Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05093 and BSU33620

See DNA alignment / Visit BSNT_05093 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_05093___yvaK.1.22522.seq
#    -bsequence pep-align/BSU33620___yvaK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05093___yvaK-BSU33620___yvaK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05093___yvaK-BSU33620___yvaK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05093___yvaK
# 2: BSU33620___yvaK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     246/248 (99.2%)
# Similarity:   246/248 (99.2%)
# Gaps:           2/248 ( 0.8%)
# Score: 1324.0
# 
#
#=======================================

BSNT_05093___      1 --MKVVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAP     48
                       ||||||||||||||||||||||||||||||||||||||||||||||||
BSU33620___yv      1 MSMKVVTPKPFTFKGGDKAVLLLHGFTGNTADVRMLGRYLNERGYTCHAP     50

BSNT_05093___     49 QYEGHGVPPEELVHTGPEDWWKNVMDGYEYLKSEGYESIAACGLSLGGVF     98
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33620___yv     51 QYEGHGVPPEELVHTGPEDWWKNVMDGYEYLKSEGYESIAACGLSLGGVF    100

BSNT_05093___     99 SLKLGYTVPIKGIVPMCAPMHIKSEEVMYQGVLSYARNYKKFEGKSPEQI    148
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33620___yv    101 SLKLGYTVPIKGIVPMCAPMHIKSEEVMYQGVLSYARNYKKFEGKSPEQI    150

BSNT_05093___    149 EEEMKEFEKTPMNTLKALQDLIADVRNNVDMIYSPTFVVQARHDHMINTE    198
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33620___yv    151 EEEMKEFEKTPMNTLKALQDLIADVRNNVDMIYSPTFVVQARHDHMINTE    200

BSNT_05093___    199 SANIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW    246
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU33620___yv    201 SANIIYNEVETDDKQLKWYEESGHVITLDKERDLVHQDVYEFLEKLDW    248


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