Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04983 and BSU33410

See DNA alignment / Visit BSNT_04983 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_04983___yvgO.1.22522.seq
#    -bsequence pep-align/BSU33410___yvgO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04983___yvgO-BSU33410___yvgO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04983___yvgO-BSU33410___yvgO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04983___yvgO
# 2: BSU33410___yvgO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     160/161 (99.4%)
# Similarity:   160/161 (99.4%)
# Gaps:           0/161 ( 0.0%)
# Score: 842.0
# 
#
#=======================================

BSNT_04983___      1 MKRIRIPMTLALGAALTIAPLSFASAEENPAPKMSQTTAAGTTAADVGLN     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU33410___yv      1 MKRIRIPMTLALGAALTIAPLSFASAEENPAPKMSQTTTAGTTAADVGLN     50

BSNT_04983___     51 VNLDVLGIANQIADAIKSAQNRDGFVKNLMESSFYASGQKYNVMVFNLSQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33410___yv     51 VNLDVLGIANQIADAIKSAQNRDGFVKNLMESSFYASGQKYNVMVFNLSQ    100

BSNT_04983___    101 EYEDHLNGVQFYGSAVYDGITYGIWVFEDGTFTNKGDGGWINWAFRGWFD    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33410___yv    101 EYEDHLNGVQFYGSAVYDGITYGIWVFEDGTFTNKGDGGWINWAFRGWFD    150

BSNT_04983___    151 RDGSTVAFHRP    161
                     |||||||||||
BSU33410___yv    151 RDGSTVAFHRP    161


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.