Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04969 and BSU33320

See DNA alignment / Visit BSNT_04969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_04969___fhuD.1.22522.seq
#    -bsequence pep-align/BSU33320___fhuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04969___fhuD-BSU33320___fhuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04969___fhuD-BSU33320___fhuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04969___fhuD
# 2: BSU33320___fhuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     310/315 (98.4%)
# Similarity:   315/315 (100.0%)
# Gaps:           0/315 ( 0.0%)
# Score: 1626.0
# 
#
#=======================================

BSNT_04969___      1 MTHIYKKLGAAFFALLLIAALAACGNNSESKGSASDSKGAETFTYKAENG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33320___fh      1 MTHIYKKLGAAFFALLLIAALAACGNNSESKGSASDSKGAETFTYKAENG     50

BSNT_04969___     51 NVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTDGVE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
BSU33320___fh     51 NVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTNGVE    100

BSNT_04969___    101 NIGDGTSVEKVIDLNPDLIIVWTTQGADIKKLEKIAPTVAVKYDKLDNIE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33320___fh    101 NIGDGTSVEKVIDLNPDLIIVWTTQGADIKKLEKIAPTVAVKYDKLDNIE    150

BSNT_04969___    151 QLKEFAKMTGTEDKAEKWLAEWDKKVAAAKTKIKKAVGDKTISIMQTNGK    200
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BSU33320___fh    151 QLKEFAKMTGTEDKAEKWLAKWDKKVAAAKTKIKKAVGDKTISIMQTNGK    200

BSNT_04969___    201 DIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDF    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33320___fh    201 DIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDF    250

BSNT_04969___    251 AGDYIFAGPWQSGGDDGGVFDSSIWKNLNAVKNGHVYKIDPIGFYFTDPI    300
                     ||||||||||||||||||||:|||||||||||||||||:|||||||||||
BSU33320___fh    251 AGDYIFAGPWQSGGDDGGVFESSIWKNLNAVKNGHVYKMDPIGFYFTDPI    300

BSNT_04969___    301 SLEGQLEYITESLTK    315
                     |||||||:|||||||
BSU33320___fh    301 SLEGQLEFITESLTK    315


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.