Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_04956 and BSU33240

See DNA alignment / Visit BSNT_04956 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_04956___oxdC.1.22522.seq
#    -bsequence pep-align/BSU33240___oxdC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04956___oxdC-BSU33240___oxdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04956___oxdC-BSU33240___oxdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04956___oxdC
# 2: BSU33240___oxdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity:     383/385 (99.5%)
# Similarity:   384/385 (99.7%)
# Gaps:           0/385 ( 0.0%)
# Score: 2045.0
# 
#
#=======================================

BSNT_04956___      1 MKKQNDIPQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33240___ox      1 MKKQNDIPQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKF     50

BSNT_04956___     51 SFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHKEA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33240___ox     51 SFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLKPGAIRELHWHKEA    100

BSNT_04956___    101 EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33240___ox    101 EWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAE    150

BSNT_04956___    151 FLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEIANLPGKEKY    200
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
BSU33240___ox    151 FLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKY    200

BSNT_04956___    201 IFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGNVYIADSTN    250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU33240___ox    201 IFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIADSTN    250

BSNT_04956___    251 FKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33240___ox    251 FKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHA    300

BSNT_04956___    301 RTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWLA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33240___ox    301 RTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWLA    350

BSNT_04956___    351 MLPETFVQAHLDLGKDFTDVLSKEKHPVVKKKCSK    385
                     |||||||||||||||||||||||||||||||||||
BSU33240___ox    351 MLPETFVQAHLDLGKDFTDVLSKEKHPVVKKKCSK    385


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.