Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04921 and BSU33050

See DNA alignment / Visit BSNT_04921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:24
# Commandline: needle
#    -asequence pep-align/BSNT_04921___gerAA.1.22522.seq
#    -bsequence pep-align/BSU33050___gerAA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04921___gerAA-BSU33050___gerAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04921___gerAA-BSU33050___gerAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04921___gerAA
# 2: BSU33050___gerAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity:     475/482 (98.5%)
# Similarity:   478/482 (99.2%)
# Gaps:           0/482 ( 0.0%)
# Score: 2370.0
# 
#
#=======================================

BSNT_04921___      1 MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSELTD     50
                     |||||||||||||||||||||||||||||||||||||||||||||||:||
BSU33050___ge      1 MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTD     50

BSNT_04921___     51 ENKVSEAIKTLIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33050___ge     51 ENKVSEAIKTLIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNC    100

BSNT_04921___    101 AVFINGLDKAYILTTGKKKTRSLTEPTTEIVVRGPKVAFVEDIDTNLALI    150
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU33050___ge    101 AVFINGLDKAYILTTGKKKTRSLTEPTTEKVVRGPKVAFVEDIDTNLALI    150

BSNT_04921___    151 RQRTSHPKLITKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33050___ge    151 RQRTSHPKLITKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQL    200

BSNT_04921___    201 EDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDGSP    250
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU33050___ge    201 EDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDSSP    250

BSNT_04921___    251 FVLLVPVSLGILMQSPDDYYERWISASLIRSLRYASIFITLFLSSIYIAL    300
                     |||||||||||||||||||||||||||||||||:||||||||||||||.|
BSU33050___ge    251 FVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITL    300

BSNT_04921___    301 VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPN    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33050___ge    301 VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPN    350

BSNT_04921___    351 PLGQTIGLVGGVVIGQAAVEANLVSSIMVIVVSVIALASFTVPQYGMGLS    400
                     |||||||||||||||||||||||||||:||||||||||||||||||||||
BSU33050___ge    351 PLGQTIGLVGGVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLS    400

BSNT_04921___    401 FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSL    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33050___ge    401 FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSL    450

BSNT_04921___    451 KNTDDSIIRLPIKNKPKEANNPNEPKTDSTET    482
                     ||||||||||||||||||.|||||||||||||
BSU33050___ge    451 KNTDDSIIRLPIKNKPKEVNNPNEPKTDSTET    482


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.