Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04882 and BSU32900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence pep-align/BSNT_04882.1.22522.seq
# -bsequence pep-align/BSU32900___yusR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04882-BSU32900___yusR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04882-BSU32900___yusR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04882
# 2: BSU32900___yusR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 122/246 (49.6%)
# Similarity: 127/246 (51.6%)
# Gaps: 117/246 (47.6%)
# Score: 619.0
#
#
#=======================================
BSNT_04882 1 MNVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEKI 50
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 51 RKAGGQAFAIQADVSKNSDVQDMVQTIVKTYGPIDVLVNNASITRHIPMD 100
BSU32900___yu 0 -------------------------------------------------- 0
BSNT_04882 101 DLEAATEDVWDELYAVNVKGMFFCARAVVPFMKKSKAGAIVNVGSIAGVT 150
:||||||||||||||||||.|||||||||||:|
BSU32900___yu 1 -----------------MKGMFFCARAVVPFMKKSKDGAIVNVGSIAGIT 33
BSNT_04882 151 GAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAGREE 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32900___yu 34 GAGSSMPYAVSKSAVHGLTKSLAHALAPEIRVSGVAPGAVATRWWAGREE 83
BSNT_04882 201 KMKSMIGSLPLQCIAEPEEVAKLICSLVEQESLTGQIITIDSGQTL 246
|||||||||.|||||||::||||||||:||||||||||||||||||
BSU32900___yu 84 KMKSMIGSLLLQCIAEPDDVAKLICSLIEQESLTGQIITIDSGQTL 129
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