Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04805 and BSU32460

See DNA alignment / Visit BSNT_04805 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_04805___pucM.1.22522.seq
#    -bsequence pep-align/BSU32460___pucM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04805___pucM-BSU32460___pucM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04805___pucM-BSU32460___pucM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04805___pucM
# 2: BSU32460___pucM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     105/114 (92.1%)
# Similarity:   110/114 (96.5%)
# Gaps:           0/114 ( 0.0%)
# Score: 558.0
# 
#
#=======================================

BSNT_04805___      1 MGKLTTHILDLTCGKPAANVKIELKRLGESIMKEVYTNNDGRANVPLLAG     50
                     ||||||||||||||||||||||.|||||||||||||||||||.:||||||
BSU32460___pu      1 MGKLTTHILDLTCGKPAANVKIGLKRLGESIMKEVYTNNDGRVDVPLLAG     50

BSNT_04805___     51 EELVSGEYVMEFHAGDYFANKNVNTVDEPFLTIVTVRFQLADPDAHYHIP    100
                     |||:|||||||||||||||:||:|..|:||||||||||||||||||||||
BSU32460___pu     51 EELMSGEYVMEFHAGDYFASKNMNAADQPFLTIVTVRFQLADPDAHYHIP    100

BSNT_04805___    101 LLLSPFGYQVYRGS    114
                     ||||||||||||||
BSU32460___pu    101 LLLSPFGYQVYRGS    114


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.