Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04618 and BSU31340

See DNA alignment / Visit BSNT_04618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence pep-align/BSNT_04618.1.22522.seq
#    -bsequence pep-align/BSU31340___yugM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04618-BSU31340___yugM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04618-BSU31340___yugM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04618
# 2: BSU31340___yugM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:     121/142 (85.2%)
# Similarity:   122/142 (85.9%)
# Gaps:          19/142 (13.4%)
# Score: 614.0
# 
#
#=======================================

BSNT_04618         1 MRKLTGICRSAFYKIRKVLMFMKQLVKHLIIAGFSAAILSFLISFDAVYT     50
                                        |||||||||||||||||||||||||||||||
BSU31340___yu      1 -------------------MFMKQLVKHLIIAGFSAAILSFLISFDAVYT     31

BSNT_04618        51 EFSSSFGGTLSHFFIHAFLLIGLPLALFTDAVHRILHLKRTHTLFTKLGL    100
                     .|||||||||||||||:|||||||||||||||||||||||||||||||||
BSU31340___yu     32 GFSSSFGGTLSHFFIHSFLLIGLPLALFTDAVHRILHLKRTHTLFTKLGL     81

BSNT_04618       101 YATVVYVSWDSAVWLAAAMAVYFLIECAFFPVGRAKETTISM    142
                     ||||||||||||||||||||||||||||||||||||||||||
BSU31340___yu     82 YATVVYVSWDSAVWLAAAMAVYFLIECAFFPVGRAKETTISM    123


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