Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04576 and BSU31130
See
DNA alignment /
Visit
BSNT_04576 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence pep-align/BSNT_04576___yubD.1.22522.seq
# -bsequence pep-align/BSU31130___yubD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04576___yubD-BSU31130___yubD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04576___yubD-BSU31130___yubD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04576___yubD
# 2: BSU31130___yubD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 501/511 (98.0%)
# Similarity: 504/511 (98.6%)
# Gaps: 0/511 ( 0.0%)
# Score: 2510.0
#
#
#=======================================
BSNT_04576___ 1 MKTKHYWVISLLAVLAVGPGLMSNTALSSVQGLVQKAVGTSVFTSVNPIL 50
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU31130___yu 1 MKTKHYWVISLLAVLAVGPGLMSNTALSSVQGLVQKTVGTSVFTSVNPIL 50
BSNT_04576___ 51 IGNMAFALLVPAGPLLRKKFGARPVYLASLPVFILGSLLIACSGDIAWMA 100
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU31130___yu 51 IGNMAFALLVPAGPLLRKKFGARPVYLASLPVFILGSLLIACSGDIALMA 100
BSNT_04576___ 101 AGRFLQGAATGVMLMIMIPMLVLSFPIERRNYALLVLIGGFYGSVIIGTI 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31130___yu 101 AGRFLQGAATGVMLMIMIPMLVLSFPIERRNYALLVLIGGFYGSVIIGTI 150
BSNT_04576___ 151 LGTIATSCGHWRWLFFIFGTLSLIGVAVSYFFLHDEHHGASDQEQPLDHA 200
||||||||||||||||||||||||||||||||||||||||:|||||||.|
BSU31130___yu 151 LGTIATSCGHWRWLFFIFGTLSLIGVAVSYFFLHDEHHGAADQEQPLDRA 200
BSNT_04576___ 201 EILLSVFLAAASAVSFIFLQKWGLSSGYVWIGFGVTLCLLIGLLIVEYKV 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU31130___yu 201 GILLSVFLAAASAVSFIFLQKWGLSSGYVWIGFGVTLCLLIGLLIVEYKV 250
BSNT_04576___ 251 KNPFISIKLMLLPKPVLGLLIIAAGTITVAVSLSAFQGLLRQMYDISQEH 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31130___yu 251 KNPFISIKLMLLPKPVLGLLIIAAGTITVAVSLSAFQGLLRQMYDISQEH 300
BSNT_04576___ 301 LILLHLTLLIGVAIAAILSALFYDKVGPGMLGIIGGLILVFVNFQWLHMQ 350
||||.||||||||||||||||.||||||||||||||||||||||||||:|
BSU31130___yu 301 LILLSLTLLIGVAIAAILSALLYDKVGPGMLGIIGGLILVFVNFQWLHIQ 350
BSNT_04576___ 351 DRSSLYMFAALFIMLAAGTGLTVAAGLMGAAMGGPLPDLVKRMTAVQFLR 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31130___yu 351 DRSSLYMFAALFIMLAAGTGLTVAAGLMGAAMGGPLPDLVKRMTAVQFLR 400
BSNT_04576___ 401 LFVYMGVPILIGFFTKKDAARQSGSVQDSMMTAYHDLFFISFILSVLLVC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU31130___yu 401 LFVYMGVPILIGFFTKKDAARQSGSVQDSMMTAYHDLFFISFILSVLLVC 450
BSNT_04576___ 451 LSFCMNATGMGHKLAHKPHDKAKTASEKPAVSAEGLSKATVKSYKVINDT 500
|||||||||||||||||||||||||.|||||||:||||||||||||||||
BSU31130___yu 451 LSFCMNATGMGHKLAHKPHDKAKTAPEKPAVSAQGLSKATVKSYKVINDT 500
BSNT_04576___ 501 EYRNALRNLQK 511
|||||||||||
BSU31130___yu 501 EYRNALRNLQK 511
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.