Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04501 and BSU30960

See DNA alignment / Visit BSNT_04501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_04501___glgD.1.22522.seq
#    -bsequence pep-align/BSU30960___glgD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04501___glgD-BSU30960___glgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04501___glgD-BSU30960___glgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04501___glgD
# 2: BSU30960___glgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity:     343/343 (100.0%)
# Similarity:   343/343 (100.0%)
# Gaps:           0/343 ( 0.0%)
# Score: 1807.0
# 
#
#=======================================

BSNT_04501___      1 MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl      1 MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNA     50

BSNT_04501___     51 DIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHHEYDEF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl     51 DIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHHEYDEF    100

BSNT_04501___    101 GSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl    101 GSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTE    150

BSNT_04501___    151 VFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSALTICPYE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl    151 VFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSALTICPYE    200

BSNT_04501___    201 YSGYAAVIDSVEKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl    201 YSGYAAVIDSVEKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYG    250

BSNT_04501___    251 KHSTVKNSLVANGCVLEGEVENCILFRAVHVGKGTKLKNCIIMQKTQIGE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl    251 KHSTVKNSLVANGCVLEGEVENCILFRAVHVGKGTKLKNCIIMQKTQIGE    300

BSNT_04501___    301 DCLLEQVISDKDVKIGKATEAAGTAEQPLVLRKGLVQGELMNS    343
                     |||||||||||||||||||||||||||||||||||||||||||
BSU30960___gl    301 DCLLEQVISDKDVKIGKATEAAGTAEQPLVLRKGLVQGELMNS    343


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