Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04490 and BSU30860

See DNA alignment / Visit BSNT_04490 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence pep-align/BSNT_04490___ytcA.1.22522.seq
#    -bsequence pep-align/BSU30860___ytcA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04490___ytcA-BSU30860___ytcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04490___ytcA-BSU30860___ytcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04490___ytcA
# 2: BSU30860___ytcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity:     424/428 (99.1%)
# Similarity:   427/428 (99.8%)
# Gaps:           0/428 ( 0.0%)
# Score: 2175.0
# 
#
#=======================================

BSNT_04490___      1 MKICVVGAGYVGLTLSAALASIGHDMICTDKDVKKIGQLKKGVIPFYEPG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt      1 MKICVVGAGYVGLTLSAALASIGHDMICTDKDVKKIGQLKKGVIPFYEPG     50

BSNT_04490___     51 LSDAILRCGNLSFSSEVKSSMEECPVIFIAVGTPPRSDGSADTKALQSVI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt     51 LSDAILRCGNLSFSSEVKSSMEECPVIFIAVGTPPRSDGSADTKALQSVI    100

BSNT_04490___    101 GDLSESIRSYKTIITKSTVPPGTNENIAKQLIASGVSRNLFNVVSNPEFL    150
                     |||||:|||||||||||||||||||||||||||||||:||||:|||||||
BSU30860___yt    101 GDLSEAIRSYKTIITKSTVPPGTNENIAKQLIASGVSKNLFNIVSNPEFL    150

BSNT_04490___    151 REGNALYDMLHPDKTVIGVQEEDHVSAAIVKSIYKHIDTPFIVTSLAGAE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt    151 REGNALYDMLHPDKTVIGVQEEDHVSAAIVKSIYKHIDTPFIVTSLAGAE    200

BSNT_04490___    201 LIKYANNFFLAAKISFINEMARICEAYQSDISDISRAIGLDPRIGKHFLQ    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt    201 LIKYANNFFLAAKISFINEMARICEAYQSDISDISRAIGLDPRIGKHFLQ    250

BSNT_04490___    251 AGIGYGGSCFPKDLQALQFAAQEKNTETFLLRAVQHINDTQLGLYIKKIQ    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt    251 AGIGYGGSCFPKDLQALQFAAQEKNTETFLLRAVQHINDTQLGLYIKKIQ    300

BSNT_04490___    301 SFFETLQGKKAAVLGISFKPNTDDIRNSQAVRLMERLAELGCDVHAYDPE    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30860___yt    301 SFFETLQGKKAAVLGISFKPNTDDIRNSQAVRLMERLAELGCDVHAYDPE    350

BSNT_04490___    351 AVLPEHLRQHVTQHSQAFDAIEESDFLFLATEWPEFLAFDWKKAADIMKG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30860___yt    351 AVLPEHLRQHVTQHSQAFDAIEESDFLFLATEWSEFLAFDWKKAADIMKG    400

BSNT_04490___    401 RLVIDGRNVLKKELIEACGLICTGVGRP    428
                     ||||||||||||||||||||||||||||
BSU30860___yt    401 RLVIDGRNVLKKELIEACGLICTGVGRP    428


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.