Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04489 and BSU30850

See DNA alignment / Visit BSNT_04489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:17
# Commandline: needle
#    -asequence pep-align/BSNT_04489___ytdA.1.22522.seq
#    -bsequence pep-align/BSU30850___ytdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04489___ytdA-BSU30850___ytdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04489___ytdA-BSU30850___ytdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04489___ytdA
# 2: BSU30850___ytdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     269/272 (98.9%)
# Similarity:   269/272 (98.9%)
# Gaps:           0/272 ( 0.0%)
# Score: 1385.0
# 
#
#=======================================

BSNT_04489___      1 MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIED     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30850___yt      1 MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIED     50

BSNT_04489___     51 ILMVVSSHKNLIVDYFDSSLALEAFLASKNKLHLLNEHPIPDIRIHYVRQ    100
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU30850___yt     51 ILMVVSSHKNLIVDYFDSSLALEAFLASKNKLHLLREHPIPDIRIHYVRQ    100

BSNT_04489___    101 PYAKGLGDAICFGKQFAGGEPFAVVLPDDLIFSANQPALGQLIEAYTKYQ    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU30850___yt    101 PYAKGLGDAISFGKQFAGGEPFAVVLPDDLIFSANQPALGQLIEAYTKYQ    150

BSNT_04489___    151 SSVIGLKETKTEDLHHYGVIKGEPVEKGLYRIQDIVEKPKQNPPSHFAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30850___yt    151 SSVIGLKETKTEDLHHYGVIKGEPVEKGLYRIQDIVEKPKQNPPSHFAAA    200

BSNT_04489___    201 GRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACAVYGKLLEGERYD    250
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30850___yt    201 GRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVYGKLLEGERYD    250

BSNT_04489___    251 IGLQKDYLKLIYDMLKTEKNPQ    272
                     ||||||||||||||||||||||
BSU30850___yt    251 IGLQKDYLKLIYDMLKTEKNPQ    272


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