Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04454 and BSU30610

See DNA alignment / Visit BSNT_04454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_04454___ytlC.1.22522.seq
#    -bsequence pep-align/BSU30610___ytlC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04454___ytlC-BSU30610___ytlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04454___ytlC-BSU30610___ytlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: BSU30610___ytlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     260/260 (100.0%)
# Similarity:   260/260 (100.0%)
# Gaps:           0/260 ( 0.0%)
# Score: 1331.0
# 
#
#=======================================

BSNT_04454___      1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30610___yt      1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLL     50

BSNT_04454___     51 SIIAGLIEPSEGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30610___yt     51 SIIAGLIEPSEGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG    100

BSNT_04454___    101 LKIADTLTEESKAAALGLLPEFGLIDVEKKYPKELSGGMRQRAALARTLA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30610___yt    101 LKIADTLTEESKAAALGLLPEFGLIDVEKKYPKELSGGMRQRAALARTLA    150

BSNT_04454___    151 PNPSLLLLDEPFSALDFQTKLSLENLVFRTLKEYQKTAVLVTHDIGEAIA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30610___yt    151 PNPSLLLLDEPFSALDFQTKLSLENLVFRTLKEYQKTAVLVTHDIGEAIA    200

BSNT_04454___    201 MSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQTLFQTIWKEL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30610___yt    201 MSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQTLFQTIWKEL    250

BSNT_04454___    251 NSLEKQQRNH    260
                     ||||||||||
BSU30610___yt    251 NSLEKQQRNH    260


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.