Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04403 and BSU30240

See DNA alignment / Visit BSNT_04403 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_04403.1.22522.seq
#    -bsequence pep-align/BSU30240___bioW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04403-BSU30240___bioW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04403-BSU30240___bioW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04403
# 2: BSU30240___bioW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     206/258 (79.8%)
# Similarity:   208/258 (80.6%)
# Gaps:          48/258 (18.6%)
# Score: 1099.0
# 
#
#=======================================

BSNT_04403         1 --------------MNGSHEDGGKHISGGERLIPFHEMKHTVNALLEKGL     36
                                   ||||||||||||||||||||||||||||||||||||
BSU30240___bi      1 MQEETFYSVRMRASMNGSHEDGGKHISGGERLIPFHEMKHTVNALLEKGL     50

BSNT_04403        37 SHSRGKPDFMQIQFEEVHESIKTIQPLPVYTNEVSCPGEGQKLARLLLEK     86
                     |||||||||||||||||||||||||||||:|||||||.||||||||||||
BSU30240___bi     51 SHSRGKPDFMQIQFEEVHESIKTIQPLPVHTNEVSCPEEGQKLARLLLEK    100

BSNT_04403        87 EGVSRDVIEKAYEQIPEWSDVRGAVLFDIHTGKRMDQTKEKGVRVSRMDW    136
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30240___bi    101 EGVSRDVIEKAYEQIPEWSDVRGAVLFDIHTGKRMDQTKEKGVRVSRMDW    150

BSNT_04403       137 PDANFEKWALHSHVPAHSRIKEALALASKVSRHPAAIAELCWSDDPDYIT    186
                     |||||||||||||||||||||||||||||||||||.:|||||||||||||
BSU30240___bi    151 PDANFEKWALHSHVPAHSRIKEALALASKVSRHPAVVAELCWSDDPDYIT    200

BSNT_04403       187 GYVAGKKMGYQRITAMKEYGTEEG--------------------------    210
                     ||||||||||||||||||||||||                          
BSU30240___bi    201 GYVAGKKMGYQRITAMKEYGTEEGCRVFFIDGSNDVNTYIHDLEKQPILI    250

BSNT_04403       210 --------    210
                             
BSU30240___bi    251 EWEEDHDS    258


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.