Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04364 and BSU29940

See DNA alignment / Visit BSNT_04364 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_04364___ytlR.1.22522.seq
#    -bsequence pep-align/BSU29940___ytlR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04364___ytlR-BSU29940___ytlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04364___ytlR-BSU29940___ytlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04364___ytlR
# 2: BSU29940___ytlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     308/309 (99.7%)
# Similarity:   308/309 (99.7%)
# Gaps:           0/309 ( 0.0%)
# Score: 1629.0
# 
#
#=======================================

BSNT_04364___      1 MSHWFFIINPTAGHRNGLRVWKSIQKELIKRKVEHRSFLTEHPGHAEVLA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt      1 MSHWFFIINPTAGHRNGLRVWKSIQKELIKRKVEHRSFLTEHPGHAEVLA     50

BSNT_04364___     51 RQISTIQEYKLKRLIVIGGDGTMHEVVNGLKDVDDIELSFVPAGAYNDFS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt     51 RQISTIQEYKLKRLIVIGGDGTMHEVVNGLKDVDDIELSFVPAGAYNDFS    100

BSNT_04364___    101 RGFSIKKIDLIQEIKKVKRPLTRTFHLGSVNFLQDKSQILYFMNHIGIGF    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    101 RGFSIKKIDLIQEIKKVKRPLTRTFHLGSVNFLQDKSQILYFMNHIGIGF    150

BSNT_04364___    151 DAYVNKKAMEFPLRRVFLFLRLRFLVYPLSHLHASATFKPFTLACTTEDE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    151 DAYVNKKAMEFPLRRVFLFLRLRFLVYPLSHLHASATFKPFTLACTTEDE    200

BSNT_04364___    201 TREFHDVWFAVVSNHPFYGGGMKAAPLANPREKTFDIVIVENQPFLKKYW    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    201 TREFHDVWFAVVSNHPFYGGGMKAAPLANPREKTFDIVIVENQPFLKKYW    250

BSNT_04364___    251 LLCLMAFGKHTKMDGVTMFKAKDITFYTKDKIPFHADGEFMGTTPFRLAS    300
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29940___yt    251 LLCLMAFGKHTKMDGVTMFKAKDITFYTKDKIPFHADGEIMGTTPFRLAS    300

BSNT_04364___    301 SPSPLRIKT    309
                     |||||||||
BSU29940___yt    301 SPSPLRIKT    309


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