Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04235 and BSU29000

See DNA alignment / Visit BSNT_04235 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_04235___nrdR.1.22522.seq
#    -bsequence pep-align/BSU29000___ytcG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04235___nrdR-BSU29000___ytcG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04235___nrdR-BSU29000___ytcG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04235___nrdR
# 2: BSU29000___ytcG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     151/152 (99.3%)
# Similarity:   151/152 (99.3%)
# Gaps:           0/152 ( 0.0%)
# Score: 781.0
# 
#
#=======================================

BSNT_04235___      1 MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29000___yt      1 MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLI     50

BSNT_04235___     51 VVKKEGVREEFSREKMLRGLIKACGKRPVSLKTLEDMCFDIEKELRNQGC    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU29000___yt     51 VVKKEGVREEFSREKMLRGLIKACEKRPVSLKTLEDMCFDIEKELRNQGC    100

BSNT_04235___    101 SEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29000___yt    101 SEVKSELVGEMVMDRLAKIDEVAYVRFASVYRQFKDINVFIDELKDLIKK    150

BSNT_04235___    151 ER    152
                     ||
BSU29000___yt    151 ER    152


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.