Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04166 and BSU28540

See DNA alignment / Visit BSNT_04166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_04166___ysiB.1.22522.seq
#    -bsequence pep-align/BSU28540___ysiB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04166___ysiB-BSU28540___ysiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04166___ysiB-BSU28540___ysiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04166___ysiB
# 2: BSU28540___ysiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     256/258 (99.2%)
# Similarity:   256/258 (99.2%)
# Gaps:           0/258 ( 0.0%)
# Score: 1267.0
# 
#
#=======================================

BSNT_04166___      1 MNAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSII     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28540___ys      1 MNAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSII     50

BSNT_04166___     51 IHGEGRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28540___ys     51 IHGEGRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAA    100

BSNT_04166___    101 IHGAALGGGLELAMACHIRIATVDAKLGLPELNLGIIPGFAGTQRLPRYV    150
                     |||||||||||||||||||||..|||||||||||||||||||||||||||
BSU28540___ys    101 IHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYV    150

BSNT_04166___    151 GTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEK    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28540___ys    151 GTAKALELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEK    200

BSNT_04166___    201 SPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28540___ys    201 SPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEK    250

BSNT_04166___    251 RKPQFKGE    258
                     ||||||||
BSU28540___ys    251 RKPQFKGE    258


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.