Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04149 and BSU28440

See DNA alignment / Visit BSNT_04149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence pep-align/BSNT_04149___sdhA.1.22522.seq
#    -bsequence pep-align/BSU28440___sdhA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04149___sdhA-BSU28440___sdhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04149___sdhA-BSU28440___sdhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04149___sdhA
# 2: BSU28440___sdhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity:     586/586 (100.0%)
# Similarity:   586/586 (100.0%)
# Gaps:           0/586 ( 0.0%)
# Score: 3093.0
# 
#
#=======================================

BSNT_04149___      1 MSQSSIIVVGGGLAGLMATIKAAESGMAVKLFSIVPVKRSHSVCAQGGIN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd      1 MSQSSIIVVGGGLAGLMATIKAAESGMAVKLFSIVPVKRSHSVCAQGGIN     50

BSNT_04149___     51 GAVNTKGEGDSPWEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd     51 GAVNTKGEGDSPWEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMG    100

BSNT_04149___    101 VMFNRTPEGLLDFRRFGGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    101 VMFNRTPEGLLDFRRFGGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAG    150

BSNT_04149___    151 LVTKYEGWEFLGAVLDDDRTCRGIVAQNLTNMQIESFRSDAVIMATGGPG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    151 LVTKYEGWEFLGAVLDDDRTCRGIVAQNLTNMQIESFRSDAVIMATGGPG    200

BSNT_04149___    201 IIFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGDDKLRLMS    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    201 IIFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGDDKLRLMS    250

BSNT_04149___    251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    251 ESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK    300

BSNT_04149___    301 LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    301 LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPA    350

BSNT_04149___    351 VHYSMGGLWVDYDQMTNIPGLFAAGECDYSMHGGNRLGANSLLSAIYGGM    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    351 VHYSMGGLWVDYDQMTNIPGLFAAGECDYSMHGGNRLGANSLLSAIYGGM    400

BSNT_04149___    401 VAGPNAVKYVNGLESSAEDMSSSLFDAHVKKEEEKWADIMSMDGTENAYV    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    401 VAGPNAVKYVNGLESSAEDMSSSLFDAHVKKEEEKWADIMSMDGTENAYV    450

BSNT_04149___    451 LHKELGEWMTANVTVVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQ    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    451 LHKELGEWMTANVTVVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQ    500

BSNT_04149___    501 GAMFTRQFSNMLQLARVITLGAYNRNESRGAHYKPDYPERNDDEWLKTTM    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28440___sd    501 GAMFTRQFSNMLQLARVITLGAYNRNESRGAHYKPDYPERNDDEWLKTTM    550

BSNT_04149___    551 AKHVSPYEAPEFEYQDVDVSLITPRKRDYSKKKVAK    586
                     ||||||||||||||||||||||||||||||||||||
BSU28440___sd    551 AKHVSPYEAPEFEYQDVDVSLITPRKRDYSKKKVAK    586


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