Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04112 and BSU28310

See DNA alignment / Visit BSNT_04112 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_04112___ilvB.1.22522.seq
#    -bsequence pep-align/BSU28310___ilvB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04112___ilvB-BSU28310___ilvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04112___ilvB-BSU28310___ilvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04112___ilvB
# 2: BSU28310___ilvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     571/574 (99.5%)
# Similarity:   572/574 (99.7%)
# Gaps:           0/574 ( 0.0%)
# Score: 2936.0
# 
#
#=======================================

BSNT_04112___      1 MRTNVQVDSASAKCTQTMSGALMLIESLKKEKVEMIFGYPGGAVLPIYDK     50
                     |.||||||||||:|||||||||||||||||||||||||||||||||||||
BSU28310___il      1 MGTNVQVDSASAECTQTMSGALMLIESLKKEKVEMIFGYPGGAVLPIYDK     50

BSNT_04112___     51 LYNSGLVHILPRHEQGAIHAAEGYARVSGKPGVVIATSGPGATNLVTGLA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il     51 LYNSGLVHILPRHEQGAIHAAEGYARVSGKPGVVIATSGPGATNLVTGLA    100

BSNT_04112___    101 DAMIDSLPLVVFTGQVATSVIGSDAFQEADILGITMPVTKHSYQVRQPED    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    101 DAMIDSLPLVVFTGQVATSVIGSDAFQEADILGITMPVTKHSYQVRQPED    150

BSNT_04112___    151 LPRIIKEAFHIATTGRPGPVLIDIPKDVATIEGEFSYDHEMNLPGYQPTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    151 LPRIIKEAFHIATTGRPGPVLIDIPKDVATIEGEFSYDHEMNLPGYQPTT    200

BSNT_04112___    201 EPNYLQIRKLVEAVSSAKKPVILAGAGVLHGKASEELKNYAEQQQIPVAH    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    201 EPNYLQIRKLVEAVSSAKKPVILAGAGVLHGKASEELKNYAEQQQIPVAH    250

BSNT_04112___    251 TLLGLGGFPADHPLFLGMAGMHGTYTANMALHECDLLISIGARFDDRVTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    251 TLLGLGGFPADHPLFLGMAGMHGTYTANMALHECDLLISIGARFDDRVTG    300

BSNT_04112___    301 NLKHFARNAKIAHIDIDPAEIGKIMKTQIPVVGDSKIVLQELIKQDGKQS    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    301 NLKHFARNAKIAHIDIDPAEIGKIMKTQIPVVGDSKIVLQELIKQDGKQS    350

BSNT_04112___    351 DSSEWKKQLAEWKEEYPLWYVDNEEEGFKPQKLIEYIHQFTKGEAIVATD    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    351 DSSEWKKQLAEWKEEYPLWYVDNEEEGFKPQKLIEYIHQFTKGEAIVATD    400

BSNT_04112___    401 VGQHQMWSAQFYPFQKADKWVTSGGLGTMGFGLPAAIGAQLAEKDATVVA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    401 VGQHQMWSAQFYPFQKADKWVTSGGLGTMGFGLPAAIGAQLAEKDATVVA    450

BSNT_04112___    451 VVGDGGFQMTLQELDVIRELNLPVKVVILNNACLGMVRQWQEIFYEERYS    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28310___il    451 VVGDGGFQMTLQELDVIRELNLPVKVVILNNACLGMVRQWQEIFYEERYS    500

BSNT_04112___    501 ESKFASQPDFVKLSEAYGIKGIRISSEAEAKVKLEEALTSREPVVIDVRV    550
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28310___il    501 ESKFASQPDFVKLSEAYGIKGIRISSEAEAKEKLEEALTSREPVVIDVRV    550

BSNT_04112___    551 ASEEKVFPMVAPGKGLHEMVGVKP    574
                     ||||||||||||||||||||||||
BSU28310___il    551 ASEEKVFPMVAPGKGLHEMVGVKP    574


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.