Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04088 and BSU28130

See DNA alignment / Visit BSNT_04088 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence pep-align/BSNT_04088___hemB.1.22522.seq
#    -bsequence pep-align/BSU28130___hemB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04088___hemB-BSU28130___hemB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04088___hemB-BSU28130___hemB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04088___hemB
# 2: BSU28130___hemB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     322/324 (99.4%)
# Similarity:   324/324 (100.0%)
# Gaps:           0/324 ( 0.0%)
# Score: 1655.0
# 
#
#=======================================

BSNT_04088___      1 MSQSFNRHRRLRSSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSM     50
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
BSU28130___he      1 MSQSFNRHRRLRTSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSM     50

BSNT_04088___     51 PDVYHVSLDLLKDEVAELVKLGIQSVIVFGIPEEKDDCGTQAYHDHGIVQ    100
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU28130___he     51 PDVHHVSLDLLKDEVAELVKLGIQSVIVFGIPEEKDDCGTQAYHDHGIVQ    100

BSNT_04088___    101 KAITEIKEHFPEMVVVADTCLCEYTDHGHCGLVKDGVILNDESLELLAQT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28130___he    101 KAITEIKEHFPEMVVVADTCLCEYTDHGHCGLVKDGVILNDESLELLAQT    150

BSNT_04088___    151 AVSQAKAGADIIAPSNMMDGFVTVIREALDKEGFVNIPIMSYAVKYSSEF    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28130___he    151 AVSQAKAGADIIAPSNMMDGFVTVIREALDKEGFVNIPIMSYAVKYSSEF    200

BSNT_04088___    201 YGPFRDAANSTPQFGDRKTYQMDPANRMEALREAQSDVEEGADFLIVKPS    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28130___he    201 YGPFRDAANSTPQFGDRKTYQMDPANRMEALREAQSDVEEGADFLIVKPS    250

BSNT_04088___    251 LSYMDIMRDVKNEFTLPLVAYNVSGEYSMVKAAAQNGWIKEKEIVLEILT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28130___he    251 LSYMDIMRDVKNEFTLPLVAYNVSGEYSMVKAAAQNGWIKEKEIVLEILT    300

BSNT_04088___    301 SMKRAGADLIITYHAKDAAKWLAE    324
                     ||||||||||||||||||||||||
BSU28130___he    301 SMKRAGADLIITYHAKDAAKWLAE    324


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