Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04074 and BSU28060

See DNA alignment / Visit BSNT_04074 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_04074___spoIIB.1.22522.seq
#    -bsequence pep-align/BSU28060___spoIIB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04074___spoIIB-BSU28060___spoIIB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04074___spoIIB-BSU28060___spoIIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04074___spoIIB
# 2: BSU28060___spoIIB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     325/332 (97.9%)
# Similarity:   329/332 (99.1%)
# Gaps:           0/332 ( 0.0%)
# Score: 1623.0
# 
#
#=======================================

BSNT_04074___      1 MKKRKNKKNSKAAEKALKVTINGKEETVYEQETPETEADKSMTFSNWEEK     50
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BSU28060___sp      1 MKKRKNKKNSKAAEKALKVTINGKEETVYEQETPETEANKSMTFSNWEEK     50

BSNT_04074___     51 RQAEQEVAASQEHPDEDEFNWDSEEDKVFKEDPKVVPPFQKKKTKLYAKG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp     51 RQAEQEVAASQEHPDEDEFNWDSEEDKVFKEDPKVVPPFQKKKTKLYAKG    100

BSNT_04074___    101 KTGAAKPVKRVAATIAFAAVIGTGLGLFALNISGNKEASAPASLEDSLGS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    101 KTGAAKPVKRVAATIAFAAVIGTGLGLFALNISGNKEASAPASLEDSLGS    150

BSNT_04074___    151 QTAKAGDTSTDKQTSGTEKQAAQTEGTYKTYAVQAGKFSNEKGAETLTEQ    200
                     |||||||||.||||||.|||||||||||||||||||||||||||||||||
BSU28060___sp    151 QTAKAGDTSADKQTSGAEKQAAQTEGTYKTYAVQAGKFSNEKGAETLTEQ    200

BSNT_04074___    201 LTEKGYSAVSLSKDDGYTYVIAGLASDKDVSQQLGQVLIDSDFEAWGGKE    250
                     ||||||||||||||||||||||||||:|:|||||||||||||||||||||
BSU28060___sp    201 LTEKGYSAVSLSKDDGYTYVIAGLASEKEVSQQLGQVLIDSDFEAWGGKE    250

BSNT_04074___    251 LSLSIESDMTDSFKETAELAAKAILGEDITKASVEKIEKSLGETKASETG    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU28060___sp    251 LSLSIESDMTDSFKETAELAAKAILDEDITKASVEKIEKSLGETKASETG    300

BSNT_04074___    301 EKKAILQALKELEDPSAEAGWKAQQQLLAVVK    332
                     |||||||||||||||||||||||||:||||||
BSU28060___sp    301 EKKAILQALKELEDPSAEAGWKAQQELLAVVK    332


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.