Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04048 and BSU27870

See DNA alignment / Visit BSNT_04048 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_04048___nadB.1.22522.seq
#    -bsequence pep-align/BSU27870___nadB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04048___nadB-BSU27870___nadB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04048___nadB-BSU27870___nadB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04048___nadB
# 2: BSU27870___nadB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 531
# Identity:     524/531 (98.7%)
# Similarity:   526/531 (99.1%)
# Gaps:           0/531 ( 0.0%)
# Score: 2700.0
# 
#
#=======================================

BSNT_04048___      1 MSKKTIAVIGSGAAALSLAAAFPPSYEVTVITKKSVKNSNSVYAQGGIAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na      1 MSKKTIAVIGSGAAALSLAAAFPPSYEVTVITKKSVKNSNSVYAQGGIAA     50

BSNT_04048___     51 AYAKDDSIEAHLEDTLYAGCGHNNLAIAADVLHDGKMMVQSLLERGFPFD    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27870___na     51 AYAKDDSIEAHLEDTLYAGCGHNNLAIVADVLHDGKMMVQSLLERGFPFD    100

BSNT_04048___    101 RNERGGVCLGREGAHSYNRIFHAGGDATGGLLIDYLLKRINSKIKLIENE    150
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27870___na    101 RNERGGVCLGREGAHSYNRIFHAGGDATGRLLIDYLLKRINSKIKLIENE    150

BSNT_04048___    151 MAADLLIEDGRCIGVMTKDSKGRLKVRHADEVVLAAGGCGNLFLHHTNDL    200
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na    151 TAADLLIEDGRCIGVMTKDSKGRLKVRHADEVVLAAGGCGNLFLHHTNDL    200

BSNT_04048___    201 TVTGDGLSLAYRAGAELTDLEFTQFHPTLLVKNGVSYGLVSEAVRGEGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na    201 TVTGDGLSLAYRAGAELTDLEFTQFHPTLLVKNGVSYGLVSEAVRGEGGC    250

BSNT_04048___    251 LVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGNRVYIDFSAISDFE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na    251 LVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGNRVYIDFSAISDFE    300

BSNT_04048___    301 TRFPTITAICEKAGVDIHSGKIPVAPGMHFLMGGVSVNRWGETTVPGLYA    350
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BSU27870___na    301 TRFPTITAICEKAGIDIHSGKIPVAPGMHFLMGGVSVNRWGETTVPGLYA    350

BSNT_04048___    351 IGETACSGLHGANRLASNSLLEALVFGKRAAEHIIQKPVYNRQYQSGLET    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na    351 IGETACSGLHGANRLASNSLLEALVFGKRAAEHIIQKPVYNRQYQSGLET    400

BSNT_04048___    401 SVVYEVPDIEVYELQSKMTSHMSILREQSSLIELSIWLHTLPFQEVNVKD    450
                     ||.|||||||.:||||||||||||||||||||||||||||||||||||||
BSU27870___na    401 SVFYEVPDIEGHELQSKMTSHMSILREQSSLIELSIWLHTLPFQEVNVKD    450

BSNT_04048___    451 ITIRQMELSHLWQTAKLMTFSALLREESRGAHFRTDFPHAEVSWQGRQIV    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27870___na    451 ITIRQMELSHLWQTAKLMTFSALLREESRGAHFRTDFPHAEVSWQGRQIV    500

BSNT_04048___    501 HTKKGTKIRKNEGIWNNESFTAEKITESLFS    531
                     |||||||||||||||||||||||||||||||
BSU27870___na    501 HTKKGTKIRKNEGIWNNESFTAEKITESLFS    531


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.