Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04039 and BSU27820

See DNA alignment / Visit BSNT_04039 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:19
# Commandline: needle
#    -asequence pep-align/BSNT_04039___yrbC.1.22522.seq
#    -bsequence pep-align/BSU27820___yrbC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04039___yrbC-BSU27820___yrbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04039___yrbC-BSU27820___yrbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04039___yrbC
# 2: BSU27820___yrbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     239/260 (91.9%)
# Similarity:   240/260 (92.3%)
# Gaps:          20/260 ( 7.7%)
# Score: 1216.0
# 
#
#=======================================

BSNT_04039___      1 MHQRTIPIKVYIENVKEGENMAGHSKWKNIQKRKNAQDAKRGKIFMKLAK     50
                                         ||||||||||||||||||||||||||||||
BSU27820___yr      1 --------------------MAGHSKWKNIQKRKNAQDAKRGKIFMKLAK     30

BSNT_04039___     51 EIYVAAKEGGADPEANSALRLVIEKAKGANMPNENIDRAIKKAAGGQDGS    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27820___yr     31 EIYVAAKEGGADPEANSALRLVIEKAKGANMPNENIDRAIKKAAGGQDGS     80

BSNT_04039___    101 SYEEITYEGYGPSGIAVMVECVTDNKNRTASNVRTAFNKNGGSLGESGCV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27820___yr     81 SYEEITYEGYGPSGIAVMVECVTDNKNRTASNVRTAFNKNGGSLGESGCV    130

BSNT_04039___    151 AFLFERKGFITIDRTERQIEEDELMLDVLEAGGEELRIEENLYEVFTEPE    200
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
BSU27820___yr    131 AFLFERKGFITIDRTERQIEEDELMLDVLEAGGEELRIEEDLYEVFTEPE    180

BSNT_04039___    201 HFEEVKTALESKYLISSAEVTMLPNTYAEADDQAVEKLETLIDVLEDDDD    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27820___yr    181 HFEEVKTALESKYLISSAEVTMLPNTYAEADDQAVEKLETLIDVLEDDDD    230

BSNT_04039___    251 VQEVYTNYRS    260
                     ||||||||||
BSU27820___yr    231 VQEVYTNYRS    240


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