Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04022 and BSU27730

See DNA alignment / Visit BSNT_04022 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_04022___ruvB.1.22522.seq
#    -bsequence pep-align/BSU27730___ruvB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04022___ruvB-BSU27730___ruvB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04022___ruvB-BSU27730___ruvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: BSU27730___ruvB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     334/334 (100.0%)
# Similarity:   334/334 (100.0%)
# Gaps:           0/334 ( 0.0%)
# Score: 1694.0
# 
#
#=======================================

BSNT_04022___      1 MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru      1 MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQ     50

BSNT_04022___     51 ETLDHVLLYGPPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru     51 ETLDHVLLYGPPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILT    100

BSNT_04022___    101 ALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    101 ALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDL    150

BSNT_04022___    151 PPFTLVGATTRVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    151 PPFTLVGATTRVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEV    200

BSNT_04022___    201 EIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    201 EIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALE    250

BSNT_04022___    251 RLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYE    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    251 RLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYE    300

BSNT_04022___    301 PYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD    334
                     ||||||||||||||||||||||||||||||||||
BSU27730___ru    301 PYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD    334


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.