Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03988 and BSU27470

See DNA alignment / Visit BSNT_03988 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_03988.1.22522.seq
#    -bsequence pep-align/BSU27470___yrrD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03988-BSU27470___yrrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03988-BSU27470___yrrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03988
# 2: BSU27470___yrrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     149/174 (85.6%)
# Similarity:   150/174 (86.2%)
# Gaps:          20/174 (11.5%)
# Score: 772.0
# 
#
#=======================================

BSNT_03988         1 --------------------MRTCHEVEGFPVYSERTSCYLGAISDICFS     30
                                         :|||||||||||||||||.|||.|||||||
BSU27470___yr      1 MSLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFS     50

BSNT_03988        31 LKGDCLGFILAQKRFLHHHHTLLRACDISSILDDRILASVSSEQLLPLPK     80
                     ||||||||||||||||||||.||||||||||.||||||||||||||||||
BSU27470___yr     51 LKGDCLGFILAQKRFLHHHHALLRACDISSIFDDRILASVSSEQLLPLPK    100

BSNT_03988        81 SCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDGFFSDLA    130
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27470___yr    101 SCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDGFFSDLA    150

BSNT_03988       131 GSKRQIQRADSLVEVRKDEIVLNG    154
                     ||||||||||||||||||||||||
BSU27470___yr    151 GSKRQIQRADSLVEVRKDEIVLNG    174


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.