Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03908 and BSU26940

See DNA alignment / Visit BSNT_03908 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_03908___yraH.1.22522.seq
#    -bsequence pep-align/BSU26940___yraH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03908___yraH-BSU26940___yraH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03908___yraH-BSU26940___yraH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03908___yraH
# 2: BSU26940___yraH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:     126/128 (98.4%)
# Similarity:   126/128 (98.4%)
# Gaps:           0/128 ( 0.0%)
# Score: 652.0
# 
#
#=======================================

BSNT_03908___      1 MKLLQIRLLVNDFKKSVEFYKDSLGLPISWLENEMEYALFDNGETKIELL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26940___yr      1 MKLLQIRLLVNDFKKSVEFYKDSLGLPISWLENEMEYALFDNGETKIELL     50

BSNT_03908___     51 SRETMAEIVGEEKISLEGEAQSKFLLQFKVEDVDKTYDDLHEKGVKCVNK    100
                     |||||||||||||.|||||||||||||||||||||||||||||||||.||
BSU26940___yr     51 SRETMAEIVGEEKKSLEGEAQSKFLLQFKVEDVDKTYDDLHEKGVKCENK    100

BSNT_03908___    101 PHDRKEWSARVAHFRDPDHNLIEIYKML    128
                     ||||||||||||||||||||||||||||
BSU26940___yr    101 PHDRKEWSARVAHFRDPDHNLIEIYKML    128


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