Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03904 and BSU26910

See DNA alignment / Visit BSNT_03904 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence pep-align/BSNT_03904___yraK.1.22522.seq
#    -bsequence pep-align/BSU26910___yraK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03904___yraK-BSU26910___yraK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03904___yraK-BSU26910___yraK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03904___yraK
# 2: BSU26910___yraK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     236/271 (87.1%)
# Similarity:   241/271 (88.9%)
# Gaps:          27/271 (10.0%)
# Score: 1252.0
# 
#
#=======================================

BSNT_03904___      1 ---------------------------MVHGGGGDADKFHHVANHLANWY     23
                                                :||||||||||||||||||||||
BSU26910___yr      1 MTINNGTLQVPGANIHYQVRGSGPIILLVHGGGGDADKFHHVANHLANWY     50

BSNT_03904___     24 TVVTYDRRGHSRSNLTNQIEDYRVETHSDDAHRLLAKITNKPAYVFGSSS     73
                     |||||||||||||||.||||.|||||||||||||||||||||||||||||
BSU26910___yr     51 TVVTYDRRGHSRSNLANQIEGYRVETHSDDAHRLLAKITNKPAYVFGSSS    100

BSNT_03904___     74 GAVIGLDLCIRHPEQVHVMIPHEPILLQLLHGNELKQAEQFMEDLKKNHR    123
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26910___yr    101 GAVIGLDLCIRHPEQVHVMIPHEPILLQLLHGNELKQAEQFMEDLKKNHR    150

BSNT_03904___    124 SEVIKLMSRLETDEQSKAVLTKRLLGNSTYFTEYEIQGILNYTLDFEALK    173
                     ||||||||||||||||||||||||||||||||||||||||:|||||||||
BSU26910___yr    151 SEVIKLMSRLETDEQSKAVLTKRLLGNSTYFTEYEIQGILSYTLDFEALK    200

BSNT_03904___    174 TVFTSSPMKVLPAGGSASRELFPYRCANALAEQLKTELVEFPGNHTGYTM    223
                     |||||||||:||||||||||||||||||||||||:||.||||||||||||
BSU26910___yr    201 TVFTSSPMKILPAGGSASRELFPYRCANALAEQLETEWVEFPGNHTGYTM    250

BSNT_03904___    224 HHKEFSERLHDMLEKEKKHTC    244
                     :||||||||||||||||||||
BSU26910___yr    251 YHKEFSERLHDMLEKEKKHTC    271


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